Gm18187 Pseudogene Detail

Summary

• Symbol
  Gm18187
• Name
  predicted gene, 18187

• Feature Type
  pseudogene
• IDs
  MGI:5010372
  NCBI Gene: 100416678
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:3091627-3092711 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 1.80 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  35 from dbSNP Build 142
• Strain Annotations
  6

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010372	pseudogene	Chr5:3091627-3093198 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011077	pseudogene	Chr14:11734213-11735409 (+)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0010965	pseudogene	Chr14:12669941-12671079 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011315	pseudogene	Chr14:11643794-11690155 (+)
PWK/PhJ	MGP_PWKPhJ_G0013082	pseudogene	Chr7:120957-122150 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010822	pseudogene	Chr14:11713213-11714356 (+)

Homology

• Gene Tree
  Gm18187
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  10
• RefSeq
  1

• Ensembl
  ENSMUSG00000105722 (Evidence)
• NCBI Gene
  100416678

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105722	Ensembl Gene Model | MGI Sequence Detail	1085	C57BL/6J
transcript	ENSMUST00000196476	Ensembl | MGI Sequence Detail	984	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;