Gm18353 Pseudogene Detail

Summary

• Symbol
  Gm18353
• Name
  predicted gene, 18353

• Feature Type
  pseudogene
• IDs
  MGI:5010538
  NCBI Gene: 100416995
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:48259297-48260080 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 31.11 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010538	pseudogene	Chr7:48259297-48260177 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040599	pseudogene	Chr7:49223324-49224107 (-)
A/J	MGP_AJ_G0040597	pseudogene	Chr7:48509041-48509824 (-)
AKR/J	MGP_AKRJ_G0040527	pseudogene	Chr7:49676563-49677346 (-)
BALB/cJ	MGP_BALBcJ_G0040588	pseudogene	Chr7:48175029-48175812 (-)
C3H/HeJ	MGP_C3HHeJ_G0040225	pseudogene	Chr7:50034407-50035190 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0041277	pseudogene	Chr7:51488210-51488993 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039271	pseudogene	Chr7:41446717-41447500 (-)
CBA/J	MGP_CBAJ_G0040192	pseudogene	Chr7:53254418-53255201 (-)
DBA/2J	MGP_DBA2J_G0040404	pseudogene	Chr7:47733690-47734473 (-)
FVB/NJ	MGP_FVBNJ_G0040331	pseudogene	Chr7:47675053-47675836 (-)
LP/J	MGP_LPJ_G0040443	pseudogene	Chr7:50186287-50187070 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040327	pseudogene	Chr7:52368669-52369452 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041329	pseudogene	Chr7:48650345-48651128 (-)
PWK/PhJ	MGP_PWKPhJ_G0038937	pseudogene	Chr7:41081187-41081970 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038642	pseudogene	Chr7:36804583-36805355 (-)
WSB/EiJ	MGP_WSBEiJ_G0039523	pseudogene	Chr7:49316356-49317139 (-)

Homology

• Gene Tree
  Gm18353
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000100250 (Evidence)
• NCBI Gene
  100416995

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100250	Ensembl Gene Model | MGI Sequence Detail	784	C57BL/6J
transcript	ENSMUST00000185906	Ensembl | MGI Sequence Detail	784	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;