Gm18354 Pseudogene Detail

Summary

• Symbol
  Gm18354
• Name
  predicted gene, 18354

• Feature Type
  pseudogene
• IDs
  MGI:5010539
  NCBI Gene: 100416998
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:85437379-85438231 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010539	pseudogene	Chr7:85437379-85438856 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0040602	pseudogene	Chr7:85098003-85633614 (-)
AKR/J	MGP_AKRJ_G0040532	pseudogene	Chr7:87087615-87640005 (-)
BALB/cJ	MGP_BALBcJ_G0040593	pseudogene	Chr7:84762549-85282858 (-)
C3H/HeJ	MGP_C3HHeJ_G0040230	pseudogene	Chr7:87594580-88439028 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0041298	pseudogene	Chr7:91526758-91528209 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0040197	pseudogene	Chr7:93602183-94605483 (-)
DBA/2J	MGP_DBA2J_G0040409	pseudogene	Chr7:83599401-84151372 (-)
FVB/NJ	MGP_FVBNJ_G0040345	pseudogene	Chr7:84088570-84090047 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0040340	pseudogene	Chr7:94763223-94920471 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041349	pseudogene	Chr7:87213926-87215373 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm18354
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Gm18354
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15
• RefSeq
  1

• Ensembl
  ENSMUSG00000092410 (Evidence)
• NCBI Gene
  100416998

Representative Sequences			Length	Strain/Species
genomic	100416998	NCBI Gene Model | MGI Sequence Detail	853	C57BL/6J

References

• Summaries
  All 27

  Phenotypes 24
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67