Gm18358 Pseudogene Detail

Summary

• Symbol
  Gm18358
• Name
  predicted gene, 18358

• Feature Type
  pseudogene
• IDs
  MGI:5010543
  NCBI Gene: 100417008
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:84739435-84740444 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.39 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  196 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010543	pseudogene	Chr7:84737976-84740444 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0040607	pseudogene	Chr7:85175923-85178020 (+)
AKR/J	MGP_AKRJ_G0040537	pseudogene	Chr7:87171549-87173646 (+)
BALB/cJ	MGP_BALBcJ_G0040598	pseudogene	Chr7:84840694-84842791 (+)
C3H/HeJ	MGP_C3HHeJ_G0040235	pseudogene	Chr7:87673948-87676046 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041286	pseudogene	Chr7:90719779-90722096 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0040202	pseudogene	Chr7:93725026-93727124 (+)
DBA/2J	MGP_DBA2J_G0040414	pseudogene	Chr7:83691382-83693480 (+)
FVB/NJ	MGP_FVBNJ_G0040339	pseudogene	Chr7:83637242-83638784 (+)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0041338	pseudogene	Chr7:86525134-86527232 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm18358
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Gm18358
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14
• RefSeq
  1

• Ensembl
  ENSMUSG00000092199 (Evidence)
• NCBI Gene
  100417008

Representative Sequences			Length	Strain/Species
genomic	100417008	NCBI Gene Model | MGI Sequence Detail	1010	C57BL/6J

References

• Summaries
  All 27

  Phenotypes 24
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67