Gm18360 Pseudogene Detail

Summary

• Symbol
  Gm18360
• Name
  predicted gene, 18360

• Feature Type
  pseudogene
• IDs
  MGI:5010545
  NCBI Gene: 100417010
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:85165931-85168625 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  209 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010545	pseudogene	Chr7:85130996-85196530 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040611	pseudogene	Chr7:87674542-87677240 (+)
A/J	MGP_AJ_G0040612	pseudogene	Chr7:85583814-85586510 (+)
AKR/J	MGP_AKRJ_G0040542	pseudogene	Chr7:87564930-87567624 (+)
BALB/cJ	MGP_BALBcJ_G0040603	pseudogene	Chr7:85234728-85237424 (+)
C3H/HeJ	MGP_C3HHeJ_G0040240	pseudogene	Chr7:88071412-88074110 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041293	pseudogene	Chr7:91219754-91233901 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039288	pseudogene	Chr7:79406088-79408624 (+)
CBA/J	MGP_CBAJ_G0040207	pseudogene	Chr7:94210432-94213130 (+)
DBA/2J	MGP_DBA2J_G0040419	pseudogene	Chr7:84102268-84105170 (+)
FVB/NJ	MGP_FVBNJ_G0040344	pseudogene	Chr7:84043888-84046562 (+)
LP/J	MGP_LPJ_G0040455	pseudogene	Chr7:88971862-88974560 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040336	pseudogene	Chr7:94287426-94288751 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041344	pseudogene	Chr7:86916504-86919202 (+)
PWK/PhJ	MGP_PWKPhJ_G0038951	pseudogene	Chr7:77323709-77326725 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038651	pseudogene	Chr7:74057913-74061316 (+)
WSB/EiJ	MGP_WSBEiJ_G0039537	pseudogene	Chr7:87467729-87471587 (+)

Homology

• Gene Tree
  Gm18360
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Gm18360
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000092467 (Evidence)
• NCBI Gene
  100417010

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092467	Ensembl Gene Model | MGI Sequence Detail	2695	C57BL/6J
transcript	ENSMUST00000173327	Ensembl | MGI Sequence Detail	1524	Not Applicable

References

• Summaries
  All 27

  Phenotypes 24
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67