Gm18422 Pseudogene Detail

Summary

• Symbol
  Gm18422
• Name
  predicted gene, 18422

• Feature Type
  pseudogene
• IDs
  MGI:5010607
  NCBI Gene: 100417147
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:100224190-100225221 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 46.63 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010607	pseudogene	Chr6:100224190-100225222 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039741	pseudogene	Chr6:102259676-102262792 (+)
A/J	MGP_AJ_G0039741	pseudogene	Chr6:98345836-98348952 (+)
AKR/J	MGP_AKRJ_G0039666	pseudogene	Chr6:101034085-101037201 (+)
BALB/cJ	MGP_BALBcJ_G0039710	pseudogene	Chr6:98320194-98323310 (+)
C3H/HeJ	MGP_C3HHeJ_G0039369	pseudogene	Chr6:83370453-83373569 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040272	pseudogene	Chr6:104817428-104820544 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036898	pseudogene	Chr6:96173092-96176173 (+)
CAST/EiJ	MGP_CASTEiJ_G0038490	pseudogene	Chr6:101282311-101285429 (+)
CBA/J	MGP_CBAJ_G0039344	pseudogene	Chr6:108847528-108850644 (+)
DBA/2J	MGP_DBA2J_G0039537	pseudogene	Chr6:97475245-97478361 (+)
FVB/NJ	MGP_FVBNJ_G0039495	pseudogene	Chr6:96653013-96656123 (+)
LP/J	MGP_LPJ_G0039576	pseudogene	Chr6:102297604-102300720 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039497	pseudogene	Chr6:112617242-112620358 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040373	pseudogene	Chr6:100954711-100957826 (+)
PWK/PhJ	MGP_PWKPhJ_G0038165	pseudogene	Chr6:96497391-96500506 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037912	pseudogene	Chr6:99835281-99838380 (+)
WSB/EiJ	MGP_WSBEiJ_G0038724	pseudogene	Chr6:101456575-101461004 (+)

Homology

• Gene Tree
  Gm18422
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108269 (Evidence)
• NCBI Gene
  100417147

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108269	Ensembl Gene Model | MGI Sequence Detail	1032	C57BL/6J
transcript	ENSMUST00000203663	Ensembl | MGI Sequence Detail	1032	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;