Gm18445 Pseudogene Detail

Summary

• Symbol
  Gm18445
• Name
  predicted gene, 18445

• Feature Type
  pseudogene
• IDs
  MGI:5010630
  NCBI Gene: 100417201
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:173824990-173829549 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 80.81 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  154 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010630	pseudogene	Chr1:173814492-173829549 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039932	pseudogene	Chr1:179817188-180038737 (-)
A/J	MGP_AJ_G0039940	pseudogene	Chr1:172732419-172747618 (-)
AKR/J	MGP_AKRJ_G0039860	pseudogene	Chr1:177905864-177914715 (-)
BALB/cJ	MGP_BALBcJ_G0039915	pseudogene	Chr1:173069989-173254800 (-)
C3H/HeJ	MGP_C3HHeJ_G0039563	pseudogene	Chr1:178554034-178563599 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0037056	pseudogene	Chr1:164202985-164211881 (-)
CAST/EiJ	MGP_CASTEiJ_G0038672	pseudogene	Chr1:177860650-177878271 (-)
CBA/J	MGP_CBAJ_G0039531	pseudogene	Chr1:192757362-192801613 (-)
DBA/2J	MGP_DBA2J_G0039730	pseudogene	Chr1:171651425-171686219 (-)
FVB/NJ	MGP_FVBNJ_G0039693	pseudogene	Chr1:169606219-169762952 (-)
LP/J	MGP_LPJ_G0039768	pseudogene	Chr1:180904147-181136283 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039681	pseudogene	Chr1:199748541-199946596 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040584	pseudogene	Chr1:177763701-177779067 (-)
PWK/PhJ	MGP_PWKPhJ_G0038350	pseudogene	Chr1:170668548-170766096 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0038891	pseudogene	Chr1:177872431-177917244 (-)

Homology

• Gene Tree
  Gm18445
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm18445
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000103588 (Evidence)
• NCBI Gene
  100417201

Representative Sequences			Length	Strain/Species
genomic	100417201	NCBI Gene Model | MGI Sequence Detail	4560	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;