Gm18489 Pseudogene Detail

Summary

• Symbol
  Gm18489
• Name
  predicted gene, 18489

• Feature Type
  pseudogene
• IDs
  MGI:5010674
  NCBI Gene: 100417263
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:116888226-116888776 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 69.08 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010674	pseudogene	Chr9:116888216-116888776 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014259	pseudogene	Chr9:119672019-119672574 (+)
A/J	MGP_AJ_G0014275	pseudogene	Chr9:115249579-115250128 (+)
AKR/J	MGP_AKRJ_G0014200	pseudogene	Chr9:118216242-118216796 (+)
BALB/cJ	MGP_BALBcJ_G0014225	pseudogene	Chr9:115099040-115099589 (+)
C3H/HeJ	MGP_C3HHeJ_G0014056	pseudogene	Chr9:118705561-118706110 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014679	pseudogene	Chr9:122936746-122937296 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012487	pseudogene	Chr9:112483129-112483681 (+)
CAST/EiJ	MGP_CASTEiJ_G0013708	pseudogene	Chr9:118623336-118623885 (+)
CBA/J	MGP_CBAJ_G0014038	pseudogene	Chr9:127526007-127526557 (+)
DBA/2J	MGP_DBA2J_G0014122	pseudogene	Chr9:114716784-114717334 (+)
FVB/NJ	MGP_FVBNJ_G0014121	pseudogene	Chr9:113552121-113552670 (+)
LP/J	MGP_LPJ_G0014213	pseudogene	Chr9:120011269-120011823 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014155	pseudogene	Chr9:128666440-128666990 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014648	pseudogene	Chr9:118589323-118589873 (+)
PWK/PhJ	MGP_PWKPhJ_G0013523	pseudogene	Chr9:115065302-115065854 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013314	pseudogene	Chr9:118678963-118679513 (+)
WSB/EiJ	MGP_WSBEiJ_G0013770	pseudogene	Chr9:118489403-118489955 (+)

Homology

• Gene Tree
  Gm18489
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000092184 (Evidence)
• NCBI Gene
  100417263

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092184	Ensembl Gene Model | MGI Sequence Detail	551	C57BL/6J
transcript	ENSMUST00000172565	Ensembl | MGI Sequence Detail	551	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;