Gm18513 Pseudogene Detail

Summary

• Symbol
  Gm18513
• Name
  predicted gene, 18513

• Feature Type
  pseudogene
• IDs
  MGI:5010698
  NCBI Gene: 100417297
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:52065344-52065903 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 26.36 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010698	pseudogene	Chr10:52065344-52065963 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010517	pseudogene	Chr10:51326888-51327447 (+)
A/J	MGP_AJ_G0010511	pseudogene	Chr10:49824246-49824805 (+)
AKR/J	MGP_AKRJ_G0010474	pseudogene	Chr10:50778160-50778719 (+)
BALB/cJ	MGP_BALBcJ_G0010484	pseudogene	Chr10:49926328-49926887 (+)
C3H/HeJ	MGP_C3HHeJ_G0010412	pseudogene	Chr10:51031037-51031596 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010756	pseudogene	Chr10:52954350-52954909 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009423	pseudogene	Chr10:47065692-47066219 (+)
CAST/EiJ	MGP_CASTEiJ_G0010228	pseudogene	Chr10:51148970-51149529 (+)
CBA/J	MGP_CBAJ_G0010378	pseudogene	Chr10:55213231-55213790 (+)
DBA/2J	MGP_DBA2J_G0010411	pseudogene	Chr10:49246300-49246859 (+)
FVB/NJ	MGP_FVBNJ_G0010430	pseudogene	Chr10:48595097-48595656 (+)
LP/J	MGP_LPJ_G0010499	pseudogene	Chr10:51398443-51399002 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010398	pseudogene	Chr10:57149596-57150155 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010724	pseudogene	Chr10:50708268-50708827 (+)
PWK/PhJ	MGP_PWKPhJ_G0010130	pseudogene	Chr10:49108511-49109043 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009944	pseudogene	Chr10:50324671-50325203 (+)
WSB/EiJ	MGP_WSBEiJ_G0010297	pseudogene	Chr10:50934909-50935468 (+)

Homology

• Gene Tree
  Gm18513
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm18513
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000093427 (Evidence)
• NCBI Gene
  100417297

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093427	Ensembl Gene Model | MGI Sequence Detail	560	C57BL/6J
transcript	ENSMUST00000177313	Ensembl | MGI Sequence Detail	560	Not Applicable

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87