Gm18537 Pseudogene Detail

Summary

• Symbol
  Gm18537
• Name
  predicted gene, 18537

• Feature Type
  pseudogene
• IDs
  MGI:5010722
  NCBI Gene: 100417334
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:83526380-83527363 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 35.94 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  51 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010722	pseudogene	Chr6:83526375-83527363 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039715	pseudogene	Chr4:86612687-86626193 (+)
A/J	MGP_AJ_G0039714	pseudogene	Chr4:83644629-83658024 (+)
AKR/J	MGP_AKRJ_G0039639	pseudogene	Chr4:85705530-85718445 (+)
BALB/cJ	MGP_BALBcJ_G0039683	pseudogene	Chr4:83821997-83835498 (+)
C3H/HeJ	MGP_C3HHeJ_G0039345	pseudogene	Chr4:86383991-86402499 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0036872	pseudogene	Chr4:79678709-79692786 (+)
CAST/EiJ	MGP_CASTEiJ_G0038465	pseudogene	Chr4:84245758-84260309 (+)
CBA/J	MGP_CBAJ_G0039316	pseudogene	Chr4:92692954-92706672 (+)
DBA/2J	MGP_DBA2J_G0039511	pseudogene	Chr4:83379662-83393888 (+)
FVB/NJ	MGP_FVBNJ_G0039468	pseudogene	Chr4:82354726-82370843 (+)
LP/J	MGP_LPJ_G0039549	pseudogene	Chr4:86959621-86973258 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039470	pseudogene	Chr4:97753697-97766620 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040345	pseudogene	Chr4:85796373-85811668 (+)
PWK/PhJ	MGP_PWKPhJ_G0038141	pseudogene	Chr4:81695885-81709653 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037889	pseudogene	Chr4:83332788-83346315 (+)
WSB/EiJ	MGP_WSBEiJ_G0038699	pseudogene	Chr4:86001032-86015714 (+)

Homology

• Gene Tree
  Gm18537
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm18537
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000108484 (Evidence)
• NCBI Gene
  100417334

Representative Sequences			Length	Strain/Species
genomic	100417334	NCBI Gene Model | MGI Sequence Detail	984	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48