Gm18593 Pseudogene Detail

Summary

• Symbol
  Gm18593
• Name
  predicted gene, 18593

• Feature Type
  pseudogene
• IDs
  MGI:5010778
  NCBI Gene: 100417406
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:75209150-75210696 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 39.54 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  168 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010778	pseudogene	Chr5:75209140-75210697 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013138	pseudogene	Chr5:75159186-75160719 (+)
A/J	MGP_AJ_G0013121	pseudogene	Chr5:72304267-72305821 (+)
AKR/J	MGP_AKRJ_G0013087	pseudogene	Chr5:74658655-74660208 (+)
BALB/cJ	MGP_BALBcJ_G0013102	pseudogene	Chr5:73013552-73015110 (+)
C3H/HeJ	MGP_C3HHeJ_G0012948	pseudogene	Chr5:75044331-75047301 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013462	pseudogene	Chr5:78187386-78188943 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011642	pseudogene	Chr5:67978975-67980514 (+)
CAST/EiJ	MGP_CASTEiJ_G0012683	pseudogene	Chr5:74159153-74162069 (+)
CBA/J	MGP_CBAJ_G0012920	pseudogene	Chr5:80775305-80777381 (+)
DBA/2J	MGP_DBA2J_G0012999	pseudogene	Chr5:72385103-72386657 (+)
FVB/NJ	MGP_FVBNJ_G0013002	pseudogene	Chr5:71537198-71540220 (+)
LP/J	MGP_LPJ_G0013073	pseudogene	Chr5:75586260-75587778 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013020	pseudogene	Chr5:83989170-83990723 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013464	pseudogene	Chr5:74193372-74195614 (+)
PWK/PhJ	MGP_PWKPhJ_G0012503	pseudogene	Chr5:71376255-71377870 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012303	pseudogene	Chr5:73553643-73555307 (+)
WSB/EiJ	MGP_WSBEiJ_G0012720	pseudogene	Chr5:74485812-74487360 (+)

Homology

• Gene Tree
  Gm18593
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  344 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  2
• Spontaneous
  3
• Genomic Mutations
  5 involving Gm18593
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000107162 (Evidence)
• NCBI Gene
  100417406

Representative Sequences			Length	Strain/Species
genomic	100417406	NCBI Gene Model | MGI Sequence Detail	1547	C57BL/6J

References

• Summaries
  All 347

  Diseases 1

  Phenotypes 344
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:353367 Taketomi Y, et al., Lipid-orchestrated paracrine circuit coordinates mast cell maturation and anaphylaxis through functional interaction with fibroblasts. Immunity. 2024 Aug 13;57(8):1828-1847.e11