Gm18699 Pseudogene Detail

Summary

• Symbol
  Gm18699
• Name
  predicted gene, 18699

• Feature Type
  pseudogene
• IDs
  MGI:5010884
  NCBI Gene: 100417586
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:88976696-88976938 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 45.04 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010884	pseudogene	Chr1:88976687-88977287 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010238	pseudogene	Chr1:90496424-90496666 (+)
A/J	MGP_AJ_G0010232	pseudogene	Chr1:87246999-87247241 (+)
AKR/J	MGP_AKRJ_G0010204	pseudogene	Chr1:89827372-89827614 (+)
BALB/cJ	MGP_BALBcJ_G0010208	pseudogene	Chr1:87386730-87386972 (+)
C3H/HeJ	MGP_C3HHeJ_G0010145	pseudogene	Chr1:90040548-90040790 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010477	pseudogene	Chr1:94011150-94011392 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009196	pseudogene	Chr1:81537279-81541632 (+)
CAST/EiJ	MGP_CASTEiJ_G0009971	pseudogene	Chr1:89357119-89357361 (+)
CBA/J	MGP_CBAJ_G0010114	pseudogene	Chr1:96996247-96996489 (+)
DBA/2J	MGP_DBA2J_G0010146	pseudogene	Chr1:86470327-86470569 (+)
FVB/NJ	MGP_FVBNJ_G0010165	pseudogene	Chr1:85500725-85500967 (+)
LP/J	MGP_LPJ_G0010227	pseudogene	Chr1:91636596-91636838 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010126	pseudogene	Chr1:100335063-100335305 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010443	pseudogene	Chr1:89854132-89854374 (+)
PWK/PhJ	MGP_PWKPhJ_G0009875	pseudogene	Chr1:85868116-85868358 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009692	pseudogene	Chr1:88745037-88745279 (+)
WSB/EiJ	MGP_WSBEiJ_G0010036	pseudogene	Chr1:89571337-89571579 (+)

Homology

• Gene Tree
  Gm18699
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm18699
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000099544 (Evidence)
• NCBI Gene
  100417586

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099544	Ensembl Gene Model | MGI Sequence Detail	243	C57BL/6J
transcript	ENSMUST00000190713	Ensembl | MGI Sequence Detail	243	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45