Gm18701 Pseudogene Detail

Summary

• Symbol
  Gm18701
• Name
  predicted gene, 18701

• Feature Type
  pseudogene
• IDs
  MGI:5010886
  NCBI Gene: 100417588
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:149049159-149050257 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 63.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  190 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010886	pseudogene	Chr1:149048802-149050337 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010384	pseudogene	Chr1:153789993-153791528 (+)
A/J	MGP_AJ_G0010373	pseudogene	Chr1:147527996-147529531 (+)
AKR/J	MGP_AKRJ_G0010343	pseudogene	Chr1:152083776-152085311 (+)
BALB/cJ	MGP_BALBcJ_G0010349	pseudogene	Chr1:148136611-148138146 (+)
C3H/HeJ	MGP_C3HHeJ_G0010282	pseudogene	Chr1:152271241-152272776 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010622	pseudogene	Chr1:159114401-159115936 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009301	pseudogene	Chr1:139973115-139974658 (+)
CAST/EiJ	MGP_CASTEiJ_G0010100	pseudogene	Chr1:151689840-151691376 (+)
CBA/J	MGP_CBAJ_G0010251	pseudogene	Chr1:164726989-164728524 (+)
DBA/2J	MGP_DBA2J_G0010284	pseudogene	Chr1:146635669-146637204 (+)
FVB/NJ	MGP_FVBNJ_G0010311	pseudogene	Chr1:145079335-145080870 (+)
LP/J	MGP_LPJ_G0010370	pseudogene	Chr1:154786024-154787559 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010265	pseudogene	Chr1:172261345-172262880 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010586	pseudogene	Chr1:151890236-151891771 (+)
PWK/PhJ	MGP_PWKPhJ_G0010001	pseudogene	Chr1:145572563-145574095 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009813	pseudogene	Chr1:150527415-150528954 (+)
WSB/EiJ	MGP_WSBEiJ_G0010171	pseudogene	Chr1:151996856-151998391 (+)

Homology

• Gene Tree
  Gm18701
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm18701
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000101457 (Evidence)
• NCBI Gene
  100417588

Representative Sequences			Length	Strain/Species
genomic	100417588	NCBI Gene Model | MGI Sequence Detail	1099	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;