Gm18716 Pseudogene Detail

Summary

• Symbol
  Gm18716
• Name
  predicted gene, 18716

• Feature Type
  pseudogene
• IDs
  MGI:5010901
  NCBI Gene: 100417616
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:65393757-65394601 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 30.20 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010901	pseudogene	Chr6:65393004-65394606 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013500	pseudogene	Chr6:65330746-65332348 (+)
A/J	MGP_AJ_G0013486	pseudogene	Chr6:62485500-62487102 (+)
AKR/J	MGP_AKRJ_G0013453	pseudogene	Chr6:64442310-64443912 (+)
BALB/cJ	MGP_BALBcJ_G0013465	pseudogene	Chr6:62885104-62886706 (+)
C3H/HeJ	MGP_C3HHeJ_G0013472	pseudogene	Chr6:119749844-119751446 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013850	pseudogene	Chr6:66856113-66857715 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011922	pseudogene	Chr6:59794083-59795669 (+)
CAST/EiJ	MGP_CASTEiJ_G0013018	pseudogene	Chr6:64719469-64721081 (+)
CBA/J	MGP_CBAJ_G0013282	pseudogene	Chr6:69571517-69573119 (+)
DBA/2J	MGP_DBA2J_G0013366	pseudogene	Chr6:62182857-62184459 (+)
FVB/NJ	MGP_FVBNJ_G0013365	pseudogene	Chr6:61709202-61710804 (+)
LP/J	MGP_LPJ_G0013436	pseudogene	Chr6:65262751-65264353 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013384	pseudogene	Chr6:73328744-73330346 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013848	pseudogene	Chr6:64406195-64407797 (+)
PWK/PhJ	MGP_PWKPhJ_G0012825	pseudogene	Chr6:61318531-61320143 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012609	pseudogene	Chr6:63928106-63929703 (+)
WSB/EiJ	MGP_WSBEiJ_G0013065	pseudogene	Chr6:64693533-64695135 (+)

Homology

• Gene Tree
  Gm18716
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000107584 (Evidence)
• NCBI Gene
  100417616

Representative Sequences			Length	Strain/Species
genomic	100417616	NCBI Gene Model | MGI Sequence Detail	845	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;