Gvin-ps4 Pseudogene Detail

Summary

• Symbol
  Gvin-ps4
• Name
  GTPase, very large interferon inducible, pseudogene 4
• Synonyms
  Gm18853

• Feature Type
  pseudogene
• IDs
  MGI:5011038
  NCBI Gene: 100417831
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:105785611-105789206 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 55.98 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011038	pseudogene	Chr7:105784950-105789306 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040657	pseudogene	Chr7:109201957-109205549 (-)
A/J	MGP_AJ_G0040655	pseudogene	Chr7:106382059-106385651 (-)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0040646	pseudogene	Chr7:106419949-106423541 (-)
C3H/HeJ	MGP_C3HHeJ_G0039638	pseudogene	Chr12:61418659-61421950 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039324	pseudogene	Chr7:101072598-101076191 (-)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0040501	pseudogene	Chr7:110602198-110605790 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040379	pseudogene	Chr7:119365567-119369162 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gvin-ps4
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gvin-ps4
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13
• RefSeq
  1

• Ensembl
  ENSMUSG00000098934 (Evidence)
• NCBI Gene
  100417831

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098934	Ensembl Gene Model | MGI Sequence Detail	3596	C57BL/6J
transcript	ENSMUST00000183629	Ensembl | MGI Sequence Detail	3596	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:6441889

References

• Summaries
  All 14

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67