Gm18916 Pseudogene Detail

Summary

• Symbol
  Gm18916
• Name
  predicted gene, 18916

• Feature Type
  pseudogene
• IDs
  MGI:5011101
  NCBI Gene: 100417950
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:126071679-126072924 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 55.80 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  165 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011101	pseudogene	Chr3:126071652-126072924 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012401	pseudogene	Chr3:128679312-128680557 (+)
A/J	MGP_AJ_G0012396	pseudogene	Chr3:124297257-124298502 (+)
AKR/J	MGP_AKRJ_G0012360	pseudogene	Chr3:127503147-127504392 (+)
BALB/cJ	MGP_BALBcJ_G0012379	pseudogene	Chr3:124148473-124149718 (+)
C3H/HeJ	MGP_C3HHeJ_G0012241	pseudogene	Chr3:127873879-127875124 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012693	pseudogene	Chr3:133346249-133347494 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011060	pseudogene	Chr3:119565088-119566321 (+)
CAST/EiJ	MGP_CASTEiJ_G0012008	pseudogene	Chr3:127385911-127387152 (+)
CBA/J	MGP_CBAJ_G0012220	pseudogene	Chr3:137805595-137806840 (+)
DBA/2J	MGP_DBA2J_G0012277	pseudogene	Chr3:123530360-123531605 (+)
FVB/NJ	MGP_FVBNJ_G0012279	pseudogene	Chr3:121102813-121104058 (+)
LP/J	MGP_LPJ_G0012347	pseudogene	Chr3:130221307-130222552 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012283	pseudogene	Chr3:145778439-145779684 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012696	pseudogene	Chr3:127144703-127145948 (+)
PWK/PhJ	MGP_PWKPhJ_G0011850	pseudogene	Chr3:123230878-123232123 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011668	pseudogene	Chr3:125186799-125188036 (+)
WSB/EiJ	MGP_WSBEiJ_G0012038	pseudogene	Chr3:127847766-127849011 (+)

Homology

• Gene Tree
  Gm18916
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm18916
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000106094 (Evidence)
• NCBI Gene
  100417950

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106094	Ensembl Gene Model | MGI Sequence Detail	1246	C57BL/6J
transcript	ENSMUST00000198264	Ensembl | MGI Sequence Detail	1246	Not Applicable

References

• Summaries
  All 7

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426