Gm19029 Pseudogene Detail

Summary

• Symbol
  Gm19029
• Name
  predicted gene, 19029

• Feature Type
  pseudogene
• IDs
  MGI:5011214
  NCBI Gene: 100418141
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:99933746-99934309 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 48.69 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011214	pseudogene	Chr1:99933740-99934309 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010258	pseudogene	Chr1:101864119-101864682 (+)
A/J	MGP_AJ_G0010250	pseudogene	Chr1:98422027-98422590 (+)
AKR/J	MGP_AKRJ_G0010221	pseudogene	Chr1:101128838-101129401 (+)
BALB/cJ	MGP_BALBcJ_G0010226	pseudogene	Chr1:98433879-98434442 (+)
C3H/HeJ	MGP_C3HHeJ_G0010164	pseudogene	Chr1:101468456-101469019 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010497	pseudogene	Chr1:105851925-105852488 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009209	pseudogene	Chr1:92586081-92586647 (+)
CAST/EiJ	MGP_CASTEiJ_G0009989	pseudogene	Chr1:100507409-100507967 (+)
CBA/J	MGP_CBAJ_G0010133	pseudogene	Chr1:109381850-109382413 (+)
DBA/2J	MGP_DBA2J_G0010165	pseudogene	Chr1:97493965-97494528 (+)
FVB/NJ	MGP_FVBNJ_G0010183	pseudogene	Chr1:96454111-96454674 (+)
LP/J	MGP_LPJ_G0010245	pseudogene	Chr1:103173277-103173840 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010144	pseudogene	Chr1:113305386-113305949 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010462	pseudogene	Chr1:101181675-101182238 (+)
PWK/PhJ	MGP_PWKPhJ_G0009892	pseudogene	Chr1:96632657-96633220 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009708	pseudogene	Chr1:99976653-99977216 (+)
WSB/EiJ	MGP_WSBEiJ_G0010053	pseudogene	Chr1:100977964-100978527 (+)

Homology

• Gene Tree
  Gm19029
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm19029
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000100662 (Evidence)
• NCBI Gene
  100418141

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100662	Ensembl Gene Model | MGI Sequence Detail	564	C57BL/6J
transcript	ENSMUST00000189923	Ensembl | MGI Sequence Detail	564	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45