Gm19035 Pseudogene Detail

Summary

• Symbol
  Gm19035
• Name
  predicted gene, 19035

• Feature Type
  pseudogene
• IDs
  MGI:5011220
  NCBI Gene: 100418149
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:37214552-37215510 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 19.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  190 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011220	pseudogene	Chr18:37214552-37215510 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039684	pseudogene	Chr18:35474377-35476818 (+)
A/J	MGP_AJ_G0039684	pseudogene	Chr18:34248651-34251108 (+)
AKR/J	MGP_AKRJ_G0039609	pseudogene	Chr18:35207091-35209538 (+)
BALB/cJ	MGP_BALBcJ_G0039654	pseudogene	Chr18:34293732-34296181 (+)
C3H/HeJ	MGP_C3HHeJ_G0039315	pseudogene	Chr18:35255435-35257898 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040214	pseudogene	Chr18:36756661-36759186 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036848	pseudogene	Chr18:34334398-34337324 (+)
CAST/EiJ	MGP_CASTEiJ_G0038436	pseudogene	Chr18:35248608-35251069 (+)
CBA/J	MGP_CBAJ_G0039286	pseudogene	Chr18:37829459-37831906 (+)
DBA/2J	MGP_DBA2J_G0039481	pseudogene	Chr18:33859096-33861541 (+)
FVB/NJ	MGP_FVBNJ_G0039437	pseudogene	Chr18:33586362-33588815 (+)
LP/J	MGP_LPJ_G0039520	pseudogene	Chr18:35559874-35562337 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039441	pseudogene	Chr18:39104405-39106862 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040315	pseudogene	Chr18:35078911-35081372 (+)
PWK/PhJ	MGP_PWKPhJ_G0038112	pseudogene	Chr18:34099048-34101572 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037861	pseudogene	Chr18:35332398-35334846 (+)
WSB/EiJ	MGP_WSBEiJ_G0038669	pseudogene	Chr18:34971529-34973957 (+)

Homology

• Gene Tree
  Gm19035
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  1
• Targeted
  1
• Genomic Mutations
  2 involving Gm19035
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000102232 (Evidence)
• NCBI Gene
  100418149

Representative Sequences			Length	Strain/Species
genomic	100418149	NCBI Gene Model | MGI Sequence Detail	959	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:244163 Hasegawa S, et al., Distinct and Cooperative Functions for the Protocadherin-alpha, -beta and -gamma Clusters in Neuronal Survival and Axon Targeting. Front Mol Neurosci. 2016;9:155
• Latest
  J:313451 Xu L, et al., Abnormal neocortex arealization and Sotos-like syndrome-associated behavior in Setd2 mutant mice. Sci Adv. 2021 Jan;7(1)