Gm19039 Pseudogene Detail

Summary

• Symbol
  Gm19039
• Name
  predicted gene, 19039

• Feature Type
  pseudogene
• IDs
  MGI:5011224
  NCBI Gene: 100418153
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:110355041-110355589 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 51.19 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  175 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011224	pseudogene	Chr6:110355015-110355589 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013644	pseudogene	Chr6:112710206-112710780 (+)
A/J	MGP_AJ_G0013628	pseudogene	Chr6:108445085-108445659 (+)
AKR/J	MGP_AKRJ_G0013591	pseudogene	Chr6:111356032-111356606 (+)
BALB/cJ	MGP_BALBcJ_G0013608	pseudogene	Chr6:108387428-108388002 (+)
C3H/HeJ	MGP_C3HHeJ_G0013330	pseudogene	Chr6:72952250-72952824 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013994	pseudogene	Chr6:115692705-115693279 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012012	pseudogene	Chr6:105576417-105576991 (+)
CAST/EiJ	MGP_CASTEiJ_G0013147	pseudogene	Chr6:111745684-111746258 (+)
CBA/J	MGP_CBAJ_G0013426	pseudogene	Chr6:120170047-120170621 (+)
DBA/2J	MGP_DBA2J_G0013506	pseudogene	Chr6:107541421-107541995 (+)
FVB/NJ	MGP_FVBNJ_G0013507	pseudogene	Chr6:106568542-106569116 (+)
LP/J	MGP_LPJ_G0013583	pseudogene	Chr6:112801083-112801657 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013520	pseudogene	Chr6:124475021-124475595 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013985	pseudogene	Chr6:111334238-111334812 (+)
PWK/PhJ	MGP_PWKPhJ_G0012952	pseudogene	Chr6:106480960-106481533 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012736	pseudogene	Chr6:110093465-110094039 (+)
WSB/EiJ	MGP_WSBEiJ_G0013198	pseudogene	Chr6:111838560-111839134 (+)

Homology

• Gene Tree
  Gm19039
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108247 (Evidence)
• NCBI Gene
  100418153

Representative Sequences			Length	Strain/Species
genomic	100418153	NCBI Gene Model | MGI Sequence Detail	549	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;