Gm19078 Pseudogene Detail

Summary

• Symbol
  Gm19078
• Name
  predicted gene, 19078

• Feature Type
  pseudogene
• IDs
  MGI:5011263
  NCBI Gene: 100418220
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:71895885-71896828 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 32.21 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  159 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011263	pseudogene	Chr6:71895883-71896828 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013547	pseudogene	Chr6:72428709-72429654 (-)
A/J	MGP_AJ_G0013530	pseudogene	Chr6:69644971-69647173 (-)
AKR/J	MGP_AKRJ_G0013492	pseudogene	Chr6:71660876-71661822 (-)
BALB/cJ	MGP_BALBcJ_G0013509	pseudogene	Chr6:69668786-69669731 (-)
C3H/HeJ	MGP_C3HHeJ_G0013426	pseudogene	Chr6:112587550-112589530 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013897	pseudogene	Chr6:74331759-74332704 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011943	pseudogene	Chr6:68806455-68807262 (-)
CAST/EiJ	MGP_CASTEiJ_G0013052	pseudogene	Chr6:71533688-71534650 (-)
CBA/J	MGP_CBAJ_G0013329	pseudogene	Chr6:77313394-77316932 (-)
DBA/2J	MGP_DBA2J_G0013409	pseudogene	Chr6:69020105-69021095 (-)
FVB/NJ	MGP_FVBNJ_G0013409	pseudogene	Chr6:68405388-68406333 (-)
LP/J	MGP_LPJ_G0013483	pseudogene	Chr6:72347830-72348775 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013421	pseudogene	Chr6:80776743-80777689 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013889	pseudogene	Chr6:71483529-71485278 (-)
PWK/PhJ	MGP_PWKPhJ_G0012860	pseudogene	Chr6:67921952-67922947 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012641	pseudogene	Chr6:70206324-70207304 (-)
WSB/EiJ	MGP_WSBEiJ_G0013103	pseudogene	Chr6:71843590-71844535 (-)

Homology

• Gene Tree
  Gm19078
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108305 (Evidence)
• NCBI Gene
  100418220

Representative Sequences			Length	Strain/Species
genomic	100418220	NCBI Gene Model | MGI Sequence Detail	944	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;