Gm19086 Pseudogene Detail

Summary

• Symbol
  Gm19086
• Name
  predicted gene, 19086

• Feature Type
  pseudogene
• IDs
  MGI:5011271
  NCBI Gene: 100418230
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:112078819-112079483 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 50.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  219 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011271	pseudogene	Chr1:112078681-112079680 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010298	pseudogene	Chr1:114576387-114577051 (+)
A/J	MGP_AJ_G0010289	pseudogene	Chr1:110450595-110451259 (+)
AKR/J	MGP_AKRJ_G0010257	pseudogene	Chr1:113576171-113576835 (+)
BALB/cJ	MGP_BALBcJ_G0010264	pseudogene	Chr1:110634855-110635519 (+)
C3H/HeJ	MGP_C3HHeJ_G0010200	pseudogene	Chr1:114029576-114030240 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010538	pseudogene	Chr1:118912877-118913541 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010024	pseudogene	Chr1:112973616-112974281 (+)
CBA/J	MGP_CBAJ_G0010169	pseudogene	Chr1:123004973-123005637 (+)
DBA/2J	MGP_DBA2J_G0010202	pseudogene	Chr1:109553020-109553684 (+)
FVB/NJ	MGP_FVBNJ_G0010220	pseudogene	Chr1:108395074-108395738 (+)
LP/J	MGP_LPJ_G0010285	pseudogene	Chr1:115899318-115899982 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010181	pseudogene	Chr1:128620266-128620930 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010501	pseudogene	Chr1:113581020-113581684 (+)
PWK/PhJ	MGP_PWKPhJ_G0009927	pseudogene	Chr1:108560939-108561593 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009744	pseudogene	Chr1:112161412-112162076 (+)
WSB/EiJ	MGP_WSBEiJ_G0010090	pseudogene	Chr1:113475208-113475872 (+)

Homology

• Gene Tree
  Gm19086
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm19086
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000100020 (Evidence)
• NCBI Gene
  100418230

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100020	Ensembl Gene Model | MGI Sequence Detail	665	C57BL/6J
transcript	ENSMUST00000190772	Ensembl | MGI Sequence Detail	665	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45