Gm19497 Gene Detail

Summary

• Symbol
  Gm19497
• Name
  predicted gene, 19497

• Feature Type
  lncRNA gene
• IDs
  MGI:5011682
  NCBI Gene: 105246710
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr1:133987778-133988685 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 58.10 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011682	lncRNA gene	Chr1:133987389-133988720 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm19497
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  8
• Chemically induced (other)
  2
• Gene trapped
  5
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm19497
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  6
• RefSeq
  1

• Ensembl
  ENSMUSG00000120043 (Evidence)
• NCBI Gene
  105246710

Representative Sequences			Length	Strain/Species
genomic	105246710	NCBI Gene Model | MGI Sequence Detail	908	C57BL/6J
transcript	NR_165647	RefSeq | MGI Sequence Detail	569	ZRU/MplStud

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm19497:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr13765	Chr1:133988648-133988697 (-)	12 bp
Tssr13764	Chr1:133988600-133988611 (-)	79 bp
Tssr13763	Chr1:133988549-133988553 (-)	134 bp