Gm19560 Pseudogene Detail

Summary

• Symbol
  Gm19560
• Name
  predicted gene, 19560

• Feature Type
  pseudogene
• IDs
  MGI:5011745
  NCBI Gene: 102637094
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:72567036-72567300 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 38.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011745	pseudogene	Chr5:72566787-72567300 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013132	pseudogene	Chr5:72325783-72326296 (+)
A/J	MGP_AJ_G0013115	pseudogene	Chr5:69626498-69627011 (+)
AKR/J	MGP_AKRJ_G0013081	pseudogene	Chr5:71862517-71863030 (+)
BALB/cJ	MGP_BALBcJ_G0013096	pseudogene	Chr5:70316356-70316869 (+)
C3H/HeJ	MGP_C3HHeJ_G0012942	pseudogene	Chr5:72213973-72214486 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013456	pseudogene	Chr5:75326454-75326967 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011637	pseudogene	Chr5:65349859-65350373 (+)
CAST/EiJ	MGP_CASTEiJ_G0012677	pseudogene	Chr5:71328866-71329376 (+)
CBA/J	MGP_CBAJ_G0012914	pseudogene	Chr5:77726749-77727262 (+)
DBA/2J	MGP_DBA2J_G0012993	pseudogene	Chr5:69679133-69679646 (+)
FVB/NJ	MGP_FVBNJ_G0012996	pseudogene	Chr5:68861287-68861800 (+)
LP/J	MGP_LPJ_G0013067	pseudogene	Chr5:72803124-72803637 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013014	pseudogene	Chr5:81109623-81110136 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013458	pseudogene	Chr5:71441115-71441628 (+)
PWK/PhJ	MGP_PWKPhJ_G0012498	pseudogene	Chr5:68648294-68648808 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012297	pseudogene	Chr5:70815290-70815804 (+)
WSB/EiJ	MGP_WSBEiJ_G0012714	pseudogene	Chr5:71693695-71694209 (+)

Homology

• Gene Tree
  Gm19560
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm19560
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000093644 (Evidence)
• NCBI Gene
  102637094

Representative Sequences			Length	Strain/Species
genomic	102637094	NCBI Gene Model | MGI Sequence Detail	265	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17