Gm19596 Pseudogene Detail

Summary

• Symbol
  Gm19596
• Name
  predicted gene, 19596

• Feature Type
  pseudogene
• IDs
  MGI:5011781
  NCBI Gene: 100503219
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:86124134-86125176 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 37.57 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011781	pseudogene	Chr6:86103056-86125230 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040463	pseudogene	Chr6:87408080-87409122 (+)
A/J	MGP_AJ_G0040443	pseudogene	Chr6:84041598-84042640 (+)
AKR/J	MGP_AKRJ_G0040370	pseudogene	Chr6:86472021-86473063 (+)
BALB/cJ	MGP_BALBcJ_G0040449	pseudogene	Chr6:84045064-84046106 (+)
C3H/HeJ	MGP_C3HHeJ_G0040073	pseudogene	Chr6:97986891-97987933 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0041064	pseudogene	Chr6:89791105-89792147 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039135	pseudogene	Chr6:86533069-86534121 (+)
CBA/J	MGP_CBAJ_G0040040	pseudogene	Chr6:93316223-93317265 (+)
DBA/2J	MGP_DBA2J_G0040241	pseudogene	Chr6:83361592-83362634 (+)
FVB/NJ	MGP_FVBNJ_G0040192	pseudogene	Chr6:82541839-82542881 (+)
LP/J	MGP_LPJ_G0040284	pseudogene	Chr6:87451547-87452589 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040183	pseudogene	Chr6:97466278-97467320 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041141	pseudogene	Chr6:86321736-86322778 (+)
PWK/PhJ	MGP_PWKPhJ_G0038815	pseudogene	Chr6:82299849-82301020 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038524	pseudogene	Chr6:85159875-85160944 (+)
WSB/EiJ	MGP_WSBEiJ_G0039378	pseudogene	Chr6:86767326-86768368 (+)

Homology

• Gene Tree
  Gm19596
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000107857 (Evidence)
• NCBI Gene
  100503219

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107857	Ensembl Gene Model | MGI Sequence Detail	1043	C57BL/6J
transcript	ENSMUST00000203685	Ensembl | MGI Sequence Detail	739	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;