Gm19708 Gene Detail

Summary

• Symbol
  Gm19708
• Name
  predicted gene, 19708
• Synonyms
  Gm31738

• Feature Type
  lncRNA gene
• IDs
  MGI:5011893
  NCBI Gene: 102634060
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:137706631-137738449 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 64.01 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1372 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011893	lncRNA gene	Chr3:137649524-137738449 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006328	lincRNA gene	Chr3:141039279-141055052 (+)
A/J	MGP_AJ_G0006321	lincRNA gene	Chr3:136047996-136063090 (+)
AKR/J	MGP_AKRJ_G0006296	lincRNA gene	Chr3:139667360-139684361 (+)
BALB/cJ	MGP_BALBcJ_G0006295	lincRNA gene	Chr3:135858565-135873867 (+)
C3H/HeJ	MGP_C3HHeJ_G0006246	lincRNA gene	Chr3:139996093-140011138 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006460	lincRNA gene	Chr3:145898366-145915406 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005755	lincRNA gene	Chr3:131151004-131166948 (+)
CAST/EiJ	MGP_CASTEiJ_G0006180	lincRNA gene	Chr3:139761278-139779966 (+)
CBA/J	MGP_CBAJ_G0006229	lincRNA gene	Chr3:150860254-150876764 (+)
DBA/2J	MGP_DBA2J_G0006250	lincRNA gene	Chr3:135170828-135185949 (+)
FVB/NJ	MGP_FVBNJ_G0006272	lincRNA gene	Chr3:132631820-132646826 (+)
LP/J	MGP_LPJ_G0006332	lincRNA gene	Chr3:142441732-142458372 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006262	lincRNA gene	Chr3:158963579-158980963 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006466	lincRNA gene	Chr3:139209932-139226077 (+)
PWK/PhJ	MGP_PWKPhJ_G0006117	lincRNA gene	Chr3:134925066-134940464 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006030	lincRNA gene	Chr3:137296778-137311733 (+)
WSB/EiJ	MGP_WSBEiJ_G0006227	lincRNA gene	Chr3:140031499-140049476 (+)

Homology

• Gene Tree
  Gm19708
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm19708
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  3

• Ensembl
  ENSMUSG00000105296 (Evidence)
• NCBI Gene
  102634060

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105296	Ensembl Gene Model | MGI Sequence Detail	31819	C57BL/6J
transcript	ENSMUST00000199386	Ensembl | MGI Sequence Detail	1912	Not Applicable

Other
Accession IDs

MGI:5590897

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm19708:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr31935	Chr3:137706630-137706670 (+)	19 bp