Gm19710 Gene Detail

Summary

• Symbol
  Gm19710
• Name
  predicted gene, 19710

• Feature Type
  lncRNA gene
• IDs
  MGI:5011895
  NCBI Gene: 100503469
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:89906067-89908632 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 39.19 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011895	lncRNA gene	Chr3:89906067-89928752 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006236	lincRNA gene	Chr3:90260172-90284023 (+)
A/J	MGP_AJ_G0006228	lincRNA gene	Chr3:87267141-87290018 (+)
AKR/J	MGP_AKRJ_G0006204	lincRNA gene	Chr3:89400992-89425411 (+)
BALB/cJ	MGP_BALBcJ_G0006204	lincRNA gene	Chr3:87229677-87252339 (+)
C3H/HeJ	MGP_C3HHeJ_G0006154	lincRNA gene	Chr3:89580830-89604347 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006368	lincRNA gene	Chr3:93646387-93674595 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005672	lincRNA gene	Chr3:82759660-82782212 (+)
CAST/EiJ	MGP_CASTEiJ_G0006088	lincRNA gene	Chr3:89950478-89973161 (+)
CBA/J	MGP_CBAJ_G0006139	lincRNA gene	Chr3:96895971-96921108 (+)
DBA/2J	MGP_DBA2J_G0006158	lincRNA gene	Chr3:86640536-86663410 (+)
FVB/NJ	MGP_FVBNJ_G0006182	lincRNA gene	Chr3:84975854-84998530 (+)
LP/J	MGP_LPJ_G0006241	lincRNA gene	Chr3:91332235-91354913 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006172	lincRNA gene	Chr3:103074157-103098087 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006372	lincRNA gene	Chr3:89146312-89168989 (+)
PWK/PhJ	MGP_PWKPhJ_G0006033	lincRNA gene	Chr3:86529927-86553216 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005940	lincRNA gene	Chr3:88323189-88345876 (+)
WSB/EiJ	MGP_WSBEiJ_G0006135	lincRNA gene	Chr3:89547392-89570063 (+)

Homology

• Gene Tree
  Gm19710
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (other)
  1
• Gene trapped
  5
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm19710
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000105552 (Evidence)
• NCBI Gene
  100503469

Representative Sequences			Length	Strain/Species
genomic	100503469	NCBI Gene Model | MGI Sequence Detail	2566	C57BL/6J
transcript	NR_045749	RefSeq | MGI Sequence Detail	640	ZRU/MplStud

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 12

  Diseases 1

  Phenotypes 7
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm19710:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr30146	Chr3:89908143-89908153 (+)	2,081 bp