Gm20091 Pseudogene Detail

Summary

• Symbol
  Gm20091
• Name
  predicted gene, 20091

• Feature Type
  pseudogene
• IDs
  MGI:5012276
  NCBI Gene: 100504157
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:96244712-96244900 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 49.80 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  155 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012276	pseudogene	Chr10:96244593-96244991 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010540	pseudogene	Chr10:98055379-98055567 (-)
A/J	MGP_AJ_G0010534	pseudogene	Chr10:94586134-94586322 (-)
AKR/J	MGP_AKRJ_G0010494	pseudogene	Chr10:97272024-97272212 (-)
BALB/cJ	MGP_BALBcJ_G0010508	pseudogene	Chr10:94850944-94851132 (-)
C3H/HeJ	MGP_C3HHeJ_G0010431	pseudogene	Chr10:97277913-97278101 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010775	pseudogene	Chr10:101476226-101476414 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009445	pseudogene	Chr10:90111113-90111300 (-)
CAST/EiJ	MGP_CASTEiJ_G0010255	pseudogene	Chr10:97315495-97315682 (-)
CBA/J	MGP_CBAJ_G0010401	pseudogene	Chr10:105476541-105476729 (-)
DBA/2J	MGP_DBA2J_G0010432	pseudogene	Chr10:93644816-93645004 (-)
FVB/NJ	MGP_FVBNJ_G0010450	pseudogene	Chr10:92911606-92911794 (-)
LP/J	MGP_LPJ_G0010522	pseudogene	Chr10:98660818-98661006 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010424	pseudogene	Chr10:106617602-106617790 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010751	pseudogene	Chr10:97187030-97187218 (-)
PWK/PhJ	MGP_PWKPhJ_G0010155	pseudogene	Chr10:93787570-93787757 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009967	pseudogene	Chr10:96036549-96036737 (-)
WSB/EiJ	MGP_WSBEiJ_G0010320	pseudogene	Chr10:97177615-97177803 (-)

Homology

• Gene Tree
  Gm20091
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm20091
• Incidental Mutations
  APF
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000094249 (Evidence)
• NCBI Gene
  100504157

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094249	Ensembl Gene Model | MGI Sequence Detail	189	C57BL/6J
transcript	ENSMUST00000179683	Ensembl | MGI Sequence Detail	189	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87