Gm20111 Pseudogene Detail

Summary

• Symbol
  Gm20111
• Name
  predicted gene, 20111

• Feature Type
  pseudogene
• IDs
  MGI:5012296
  NCBI Gene: 105245783
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:65076549-65076867 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 33.79 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012296	pseudogene	Chr14:65076549-65076917 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011128	pseudogene	Chr14:59418765-59419083 (+)
A/J	MGP_AJ_G0011123	pseudogene	Chr14:58055746-58056064 (+)
AKR/J	MGP_AKRJ_G0011082	pseudogene	Chr14:60083343-60083661 (+)
BALB/cJ	MGP_BALBcJ_G0011093	pseudogene	Chr14:58004217-58004535 (+)
C3H/HeJ	MGP_C3HHeJ_G0010993	pseudogene	Chr14:59730060-59730378 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011386	pseudogene	Chr14:62195556-62195874 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010814	pseudogene	Chr14:56210940-56211258 (+)
CBA/J	MGP_CBAJ_G0010970	pseudogene	Chr14:64065092-64065410 (+)
DBA/2J	MGP_DBA2J_G0011017	pseudogene	Chr14:57715359-57715677 (+)
FVB/NJ	MGP_FVBNJ_G0011021	pseudogene	Chr14:57113909-57114227 (+)
LP/J	MGP_LPJ_G0011107	pseudogene	Chr14:60455478-60455796 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011012	pseudogene	Chr14:63210861-63211179 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011364	pseudogene	Chr14:59257525-59257843 (+)
PWK/PhJ	MGP_PWKPhJ_G0010684	pseudogene	Chr14:54418346-54418664 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010509	pseudogene	Chr14:55224368-55224687 (+)
WSB/EiJ	MGP_WSBEiJ_G0010859	pseudogene	Chr14:59572730-59573048 (+)

Homology

• Gene Tree
  Gm20111
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm20111
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000098837 (Evidence)
• NCBI Gene
  105245783

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098837	Ensembl Gene Model | MGI Sequence Detail	319	C57BL/6J
transcript	ENSMUST00000184830	Ensembl | MGI Sequence Detail	319	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;