Gm20118 Pseudogene Detail

Summary

• Symbol
  Gm20118
• Name
  predicted gene, 20118

• Feature Type
  pseudogene
• IDs
  MGI:5012303
  NCBI Gene: 102633655
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:50572189-50572350 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 25.91 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  162 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012303	pseudogene	Chr1:50572189-50572350 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010128	pseudogene	Chr1:49986911-49987072 (+)
A/J	MGP_AJ_G0010116	pseudogene	Chr1:48308496-48308657 (+)
AKR/J	MGP_AKRJ_G0010095	pseudogene	Chr1:49339715-49339876 (+)
BALB/cJ	MGP_BALBcJ_G0010104	pseudogene	Chr1:48131418-48131579 (+)
C3H/HeJ	MGP_C3HHeJ_G0010033	pseudogene	Chr1:49718141-49718302 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010353	pseudogene	Chr1:52116758-52116919 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009102	pseudogene	Chr1:43485758-43485919 (-)
CAST/EiJ	MGP_CASTEiJ_G0009866	pseudogene	Chr1:49152198-49152351 (+)
CBA/J	MGP_CBAJ_G0010003	pseudogene	Chr1:53486606-53486767 (+)
DBA/2J	MGP_DBA2J_G0010030	pseudogene	Chr1:47579584-47579745 (+)
FVB/NJ	MGP_FVBNJ_G0010053	pseudogene	Chr1:47038150-47038311 (+)
LP/J	MGP_LPJ_G0010119	pseudogene	Chr1:50443849-50444010 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010013	pseudogene	Chr1:56445059-56445220 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010331	pseudogene	Chr1:49457821-49457982 (+)
PWK/PhJ	MGP_PWKPhJ_G0009771	pseudogene	Chr1:47427773-47427931 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009585	pseudogene	Chr1:49104651-49104812 (+)
WSB/EiJ	MGP_WSBEiJ_G0009932	pseudogene	Chr1:49254859-49255020 (+)

Homology

• Gene Tree
  Gm20118
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm20118
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000099941 (Evidence)
• NCBI Gene
  102633655

Representative Sequences			Length	Strain/Species
genomic	102633655	NCBI Gene Model | MGI Sequence Detail	162	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45