Gm20125 Gene Detail

Summary

• Symbol
  Gm20125
• Name
  predicted gene, 20125

• Feature Type
  lncRNA gene
• IDs
  MGI:5012310
  NCBI Gene: 100504235
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:16826842-16971530 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 6.64 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3455 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012310	lncRNA gene	Chr10:16782175-16971555 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0005103	lincRNA gene	Chr10:14547700-14694430 (-)
A/J	MGP_AJ_G0005086	lincRNA gene	Chr10:13971197-14117529 (-)
AKR/J	MGP_AKRJ_G0005064	lincRNA gene	Chr10:14205595-14355573 (-)
BALB/cJ	MGP_BALBcJ_G0005067	lincRNA gene	Chr10:14035069-14187350 (-)
C3H/HeJ	MGP_C3HHeJ_G0005016	lincRNA gene	Chr10:14520518-14668954 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0005217	lincRNA gene	Chr10:14910483-15083654 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004624	lincRNA gene	Chr10:12938628-13078251 (-)
CAST/EiJ	MGP_CASTEiJ_G0004963	lincRNA gene	Chr10:14322566-14479403 (-)
CBA/J	MGP_CBAJ_G0005006	lincRNA gene	Chr10:15586104-15743598 (-)
DBA/2J	MGP_DBA2J_G0005025	lincRNA gene	Chr10:13886879-14029747 (-)
FVB/NJ	MGP_FVBNJ_G0005047	lincRNA gene	Chr10:13689200-13834193 (-)
LP/J	MGP_LPJ_G0005104	lincRNA gene	Chr10:14353748-14507286 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005030	lincRNA gene	Chr10:15923384-16105609 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005224	lincRNA gene	Chr10:14184228-14340972 (-)
PWK/PhJ	MGP_PWKPhJ_G0004914	lincRNA gene	Chr10:13713238-13867930 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004839	lincRNA gene	Chr10:14303431-14473448 (-)
WSB/EiJ	MGP_WSBEiJ_G0005010	lincRNA gene	Chr10:14242218-14388578 (-)

Homology

• Gene Tree
  Gm20125
  

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  33
• RefSeq
  1

• Ensembl
  ENSMUSG00000101969 (Evidence)
• NCBI Gene
  100504235

Representative Sequences			Length	Strain/Species
genomic	100504235	NCBI Gene Model | MGI Sequence Detail	144689	C57BL/6J
transcript	NR_038020	RefSeq | MGI Sequence Detail	3401	ZRU/MplStud

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;