Gm20128 Pseudogene Detail

Summary

• Symbol
  Gm20128
• Name
  predicted gene, 20128

• Feature Type
  pseudogene
• IDs
  MGI:5012313
  NCBI Gene: 100504238
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:58312122-58312538 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 28.51 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012313	pseudogene	Chr3:58312081-58312538 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012165	pseudogene	Chr3:57232855-57233271 (+)
A/J	MGP_AJ_G0012158	pseudogene	Chr3:55464000-55464416 (+)
AKR/J	MGP_AKRJ_G0012123	pseudogene	Chr3:56601880-56602296 (+)
BALB/cJ	MGP_BALBcJ_G0012138	pseudogene	Chr3:55272366-55272782 (+)
C3H/HeJ	MGP_C3HHeJ_G0012014	pseudogene	Chr3:56819830-56820246 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012448	pseudogene	Chr3:59345764-59346180 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010865	pseudogene	Chr3:51802880-51803277 (+)
CAST/EiJ	MGP_CASTEiJ_G0011790	pseudogene	Chr3:56977922-56978338 (+)
CBA/J	MGP_CBAJ_G0011988	pseudogene	Chr3:61321434-61321850 (+)
DBA/2J	MGP_DBA2J_G0012044	pseudogene	Chr3:54957249-54957665 (+)
FVB/NJ	MGP_FVBNJ_G0012047	pseudogene	Chr3:53929659-53930638 (+)
LP/J	MGP_LPJ_G0012112	pseudogene	Chr3:57973608-57974024 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012050	pseudogene	Chr3:65433864-65434280 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012456	pseudogene	Chr3:56555137-56555553 (+)
PWK/PhJ	MGP_PWKPhJ_G0011635	pseudogene	Chr3:54599831-54600247 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011450	pseudogene	Chr3:56229846-56230262 (+)
WSB/EiJ	MGP_WSBEiJ_G0011822	pseudogene	Chr3:56633700-56634116 (+)

Homology

• Gene Tree
  Gm20128
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm20128
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000105154 (Evidence)
• NCBI Gene
  100504238

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105154	Ensembl Gene Model | MGI Sequence Detail	417	C57BL/6J
transcript	ENSMUST00000196189	Ensembl | MGI Sequence Detail	417	Not Applicable

References

• Summaries
  All 5

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426