Selenok-ps7 Pseudogene Detail

Summary

• Symbol
  Selenok-ps7
• Name
  selenoprotein K, pseudogene 7
• Synonyms
  Gm20159

• Feature Type
  pseudogene
• IDs
  MGI:5012344
  NCBI Gene: 100504299
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:145559895-145560177 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 85.17 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  176 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012344	pseudogene	Chr5:145559532-145560250 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0013641	pseudogene	Chr5:156764458-156764740 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011139	pseudogene	Chr19:12396242-12396516 (-)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0011373	pseudogene	Chr19:12348485-12348762 (-)
LP/J	MGP_LPJ_G0013242	pseudogene	Chr5:151888461-151888743 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011369	pseudogene	Chr19:14036929-14037206 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013646	pseudogene	Chr5:149148559-149148841 (-)
PWK/PhJ	MGP_PWKPhJ_G0010998	pseudogene	Chr19:11951635-11951909 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010824	pseudogene	Chr19:12092182-12092458 (-)
WSB/EiJ	MGP_WSBEiJ_G0011170	pseudogene	Chr19:12821998-12822275 (-)

Homology

• Gene Tree
  Selenok-ps7
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  17 phenotype references
  

• All Mutations and Alleles
  4
• Targeted
  4
• Genomic Mutations
  4 involving Selenok-ps7
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14
• RefSeq
  1

• Ensembl
  ENSMUSG00000105474 (Evidence)
• NCBI Gene
  100504299

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105474	Ensembl Gene Model | MGI Sequence Detail	283	C57BL/6J
transcript	ENSMUST00000197069	Ensembl | MGI Sequence Detail	283	Not Applicable

Other
Accession IDs

MGI:5909032

References

• Summaries
  All 21

  Phenotypes 17
• Earliest
  J:127366 van Herwaarden AE, et al., Knockout of cytochrome P450 3A yields new mouse models for understanding xenobiotic metabolism. J Clin Invest. 2007 Nov;117(11):3583-92
• Latest
  J:345093 Heintz MM, et al., Human CYP2B6 produces oxylipins from polyunsaturated fatty acids and reduces diet-induced obesity. PLoS One. 2022;17(12):e0277053