Gm20274 Gene Detail

Summary

• Symbol
  Gm20274
• Name
  predicted gene, 20274

• Feature Type
  lncRNA gene
• IDs
  MGI:5012459
  NCBI Gene: 100504538
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:122594571-122595154 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 67.42 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012459	lncRNA gene	Chr7:122594571-122595154 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037078	sense intronic lncRNA gene	Chr7:127114695-127115278 (+)
A/J	MGP_AJ_G0037066	sense intronic lncRNA gene	Chr7:123815950-123817083 (+)
AKR/J	MGP_AKRJ_G0037013	sense intronic lncRNA gene	Chr7:126975015-126975598 (+)
BALB/cJ	MGP_BALBcJ_G0037057	sense intronic lncRNA gene	Chr7:123495748-123496625 (+)
C3H/HeJ	MGP_C3HHeJ_G0036744	sense intronic lncRNA gene	Chr7:126861869-126862452 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037569	sense intronic lncRNA gene	Chr7:132089102-132089685 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0036719	sense intronic lncRNA gene	Chr7:136527230-136527813 (+)
DBA/2J	MGP_DBA2J_G0036894	sense intronic lncRNA gene	Chr7:121805678-121806261 (+)
FVB/NJ	MGP_FVBNJ_G0036844	sense intronic lncRNA gene	Chr7:121659961-121660543 (+)
LP/J	MGP_LPJ_G0036941	sense intronic lncRNA gene	Chr7:128556239-128556822 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036851	sense intronic lncRNA gene	Chr7:137887378-137887980 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037687	sense intronic lncRNA gene	Chr7:125970944-125971525 (+)
PWK/PhJ	MGP_PWKPhJ_G0035624	sense intronic lncRNA gene	Chr7:114743662-114744224 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0036132	sense intronic lncRNA gene	Chr7:126882170-126882753 (+)

Homology

• Gene Tree
  Gm20274
  

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108551 (Evidence)
• NCBI Gene
  100504538

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108551	Ensembl Gene Model | MGI Sequence Detail	584	C57BL/6J
transcript	ENSMUST00000206967	Ensembl | MGI Sequence Detail	584	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;