Gm20302 Pseudogene Detail

Summary

• Symbol
  Gm20302
• Name
  predicted gene, 20302

• Feature Type
  pseudogene
• IDs
  MGI:5012487
  NCBI Gene: 102634805
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:105502262-105502536 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 49.63 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  46 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012487	pseudogene	Chr1:105502244-105502536 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010272	pseudogene	Chr1:107674364-107674638 (+)
A/J	MGP_AJ_G0010266	pseudogene	Chr1:103942072-103942332 (+)
AKR/J	MGP_AKRJ_G0010236	pseudogene	Chr1:106783052-106783312 (+)
BALB/cJ	MGP_BALBcJ_G0010241	pseudogene	Chr1:104028962-104029222 (+)
C3H/HeJ	MGP_C3HHeJ_G0010180	pseudogene	Chr1:107211414-107211674 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010513	pseudogene	Chr1:111830008-111830282 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009220	pseudogene	Chr1:98295306-98295566 (+)
CAST/EiJ	MGP_CASTEiJ_G0010003	pseudogene	Chr1:106127788-106128062 (+)
CBA/J	MGP_CBAJ_G0010149	pseudogene	Chr1:115628684-115628944 (+)
DBA/2J	MGP_DBA2J_G0010180	pseudogene	Chr1:102998660-102998934 (+)
FVB/NJ	MGP_FVBNJ_G0010199	pseudogene	Chr1:101940550-101940810 (+)
LP/J	MGP_LPJ_G0010260	pseudogene	Chr1:108952458-108952732 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010158	pseudogene	Chr1:120066686-120066960 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010478	pseudogene	Chr1:106863847-106864107 (+)
PWK/PhJ	MGP_PWKPhJ_G0009906	pseudogene	Chr1:102042854-102043238 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010067	pseudogene	Chr1:106701934-106702194 (+)

Homology

• Gene Tree
  Gm20302
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm20302
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101219 (Evidence)
• NCBI Gene
  102634805

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101219	Ensembl Gene Model | MGI Sequence Detail	275	C57BL/6J
transcript	ENSMUST00000080671	Ensembl | MGI Sequence Detail	275	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45