Gm20326 Gene Detail

Summary

• Symbol
  Gm20326
• Name
  predicted gene, 20326

• Feature Type
  lncRNA gene
• IDs
  MGI:5012511
  NCBI Gene: 100504643
• Alliance
  gene page
• Transcription Start Sites
  6 TSS

Location &
Maps

• Sequence Map
  Chr9:111967737-111970568 bp, - strand

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 62.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  198 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012511	lncRNA gene	Chr9:111967737-111970568 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Expression

• cDNA Data
  2

Sequences &
Gene Models

• All Sequences
  4
• UniProt
  1

• NCBI Gene
  100504643

Representative Sequences			Length	Strain/Species
transcript	AK135126	GenBank | ENA | DDBJ | MGI Sequence Detail	2751	C57BL/6J
polypeptide	Q3UUS2	UniProt | EBI | MGI Sequence Detail	88	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 4
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:90438 Mouse Genome Informatics Scientific Curators, Obtaining and loading genome assembly coordinates from NCBI annotations. 2005;

TSS for Gm20326:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr91760	Chr9:111970465-111970469 (-)	101 bp
Tssr91759	Chr9:111970392-111970396 (-)	174 bp
Tssr91758	Chr9:111969619-111969622 (-)	947 bp
Tssr91757	Chr9:111968495-111968506 (-)	2,067 bp
Tssr91756	Chr9:111968412-111968433 (-)	2,145 bp
Tssr91755	Chr9:111968134-111968145 (-)	2,428 bp