Gm20346 Gene Detail

Summary

• Symbol
  Gm20346
• Name
  predicted gene, 20346

• Feature Type
  protein coding gene
• IDs
  MGI:5012531
  NCBI Gene: 102638888
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr9:62248784-62251929 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 33.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012531	protein coding gene	Chr9:62248784-62251929 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  9
• Gene trapped
  9
• Find Mice (IMSR)
  0 strains or lines available

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  2

• NCBI Gene
  102638888

Representative Sequences			Length	Strain/Species
genomic	102638888	NCBI Gene Model | MGI Sequence Detail	3146	C57BL/6J
transcript	NM_001378702	RefSeq | MGI Sequence Detail	1186	ZRU/MplStud
polypeptide	NP_001365631	RefSeq | MGI Sequence Detail	174	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm20346:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr2900	Chr9:62252185-62252190 (-)	-259 bp
Tssr90039	Chr9:62251921-62251950 (-)	-7 bp
Tssr90038	Chr9:62251300-62251340 (-)	609 bp
Tssr90037	Chr9:62250848-62250881 (-)	1,064 bp
Tssr90036	Chr9:62250554-62250592 (-)	1,356 bp