Mirc6 Complex/Cluster/Region Detail

Summary

• Symbol
  Mirc6
• Name
  microRNA cluster 6, including Mir379 through Mir544

• Feature Type
  complex/cluster/region
• IDs
  MGI:5049944
• Cluster Members
  Mir379, Mir411, Mir299a ... (24 members)

Location &
Maps

• Sequence Map
  Chr12:109675494-109695836 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic

Strain
Comparison

• SNPs within 2kb
  436 from dbSNP Build 142

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotypes from 2 alleles in 2 genetic backgrounds
  4 phenotype references
  

• All Mutations and Alleles
  7
• Targeted
  7
• Find Mice (IMSR)
  3 strains or lines available
• Comparison Matrix
  Gene Expression + Phenotype

Expression

• Assay Results
  44
• Tissues
  13
• Literature Summary
  2

Images

Tissue x Stage Matrix

Comparison Matrix

Gene Expression + Phenotype

Molecular
Reagents

• All nucleic 1

  Primer pair 1

Other Database
Links

miRBase

MI0000399, MI0000400, MI0000592, MI0000605, MI0000793, MI0000796, MI0000797, MI0000798, MI0001162, MI0001163, MI0003519, MI0003520, MI0003532, MI0003533, MI0003534, MI0004129, MI0004196, MI0004553, MI0004638, MI0004639, MI0005520, MI0005555, MI0006298, MI0006305

References

• Summaries
  All 7

  Developmental Gene Expression 2

  Phenotypes 4
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
• Latest
  J:308913 Cao C, et al., Maternally expressed miR-379/miR-544 cluster is dispensable for testicular development and spermatogenesis in mice. Mol Reprod Dev. 2018 Mar;85(3):175-177

Mirc6 Cluster contains:

More Data for these features

Member	Feature Type	Location
Mir379, microRNA 379	miRNA gene	Chr12:109675494-109675559 (+)
Mir411, microRNA 411	miRNA gene	Chr12:109676609-109676690 (+)
Mir299a, microRNA 299a	miRNA gene	Chr12:109677072-109677134 (+)
Mir380, microRNA 380	miRNA gene	Chr12:109678237-109678297 (+)
Mir1197, microRNA 1197	miRNA gene	Chr12:109678751-109678870 (+)
Mir323, microRNA 323	miRNA gene	Chr12:109678942-109679027 (+)
Mir758, microRNA 758	miRNA gene	Chr12:109679244-109679324 (+)
Mir329, microRNA 329	miRNA gene	Chr12:109679915-109680011 (+)
Mir494, microRNA 494	miRNA gene	Chr12:109681752-109681836 (+)
Mir679, microRNA 679	miRNA gene	Chr12:109682011-109682084 (+)
Mir1193, microRNA 1193	miRNA gene	Chr12:109682105-109682225 (+)
Mir666, microRNA 666	miRNA gene	Chr12:109683519-109683617 (+)
Mir543, microRNA 543	miRNA gene	Chr12:109683692-109683767 (+)
Mir495, microRNA 495	miRNA gene	Chr12:109685188-109685250 (+)
Mir667, microRNA 667	miRNA gene	Chr12:109686440-109686531 (+)
Mir376c, microRNA 376c	miRNA gene	Chr12:109689152-109689237 (+)
Mir654, microRNA 654	miRNA gene	Chr12:109689652-109689735 (+)
Mir376b, microRNA 376b	miRNA gene	Chr12:109689892-109689973 (+)
Mir376a, microRNA 376a	miRNA gene	Chr12:109690215-109690282 (+)
Mir300, microRNA 300	miRNA gene	Chr12:109690747-109690825 (+)
Mir381, microRNA 381	miRNA gene	Chr12:109693256-109693330 (+)
Mir487b, microRNA 487b	miRNA gene	Chr12:109693767-109693848 (+)
Mir539, microRNA 539	miRNA gene	Chr12:109694563-109694636 (+)
Mir544, microRNA 544	miRNA gene	Chr12:109695759-109695836 (+)