Gm20441 Gene Detail

Summary

• Symbol
  Gm20441
• Name
  predicted gene 20441

• Feature Type
  protein coding gene
• IDs
  MGI:5141906
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:75607285-75616788 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 38.58 cM

Strain
Comparison

• SNPs within 2kb
  310 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5141906	protein coding gene	Chr10:75607285-75616788 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0017363	protein coding gene	Chr10:75957066-75966563 (-)
A/J	MGP_AJ_G0017340	protein coding gene	Chr10:73350581-73360073 (-)
AKR/J	MGP_AKRJ_G0017301	protein coding gene	Chr10:75315391-75324883 (-)
BALB/cJ	MGP_BALBcJ_G0017300	protein coding gene	Chr10:73546283-73555772 (-)
C3H/HeJ	MGP_C3HHeJ_G0017124	protein coding gene	Chr10:75354514-75364000 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0017758	protein coding gene	Chr10:78643029-78654136 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0015448	protein coding gene	Chr10:69804181-69814185 (-)
CAST/EiJ	MGP_CASTEiJ_G0016695	protein coding gene	Chr10:75675153-75684638 (-)
CBA/J	MGP_CBAJ_G0017096	protein coding gene	Chr10:81712795-81722283 (-)
DBA/2J	MGP_DBA2J_G0017201	protein coding gene	Chr10:72652286-72661774 (-)
FVB/NJ	MGP_FVBNJ_G0017194	protein coding gene	Chr10:71800758-71810237 (-)
LP/J	MGP_LPJ_G0017274	protein coding gene	Chr10:76461693-76472539 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0017222	protein coding gene	Chr10:83806173-83815675 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0017797	protein coding gene	Chr10:75348430-75357927 (-)
PWK/PhJ	MGP_PWKPhJ_G0016478	protein coding gene	Chr10:72478017-72487603 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0016261	protein coding gene	Chr10:74588538-74598126 (-)
WSB/EiJ	MGP_WSBEiJ_G0016758	protein coding gene	Chr10:75320745-75330333 (-)

Homology

• Gene Tree
  Gm20441
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm20441
• Incidental Mutations
  APF
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000092360 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092360	Ensembl Gene Model | MGI Sequence Detail	9504	C57BL/6J
transcript	ENSMUST00000173512	Ensembl | MGI Sequence Detail	756	Not Applicable
polypeptide	ENSMUSP00000134112	Ensembl | MGI Sequence Detail	252	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR036282 Glutathione S-transferase, C-terminal domain superfamily
  IPR010987 Glutathione S-transferase, C-terminal-like
  IPR004045 Glutathione S-transferase, N-terminal
  IPR051369 Glutathione S-transferase Theta
  IPR040075 Glutathione S-transferase Theta, N-terminal
  IPR040079 Glutathione transferase family
  IPR001398 Macrophage migration inhibitory factor
  IPR019829 Macrophage migration inhibitory factor, conserved site
  IPR014347 Tautomerase/MIF superfamily
  IPR036249 Thioredoxin-like superfamily

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

TSS for Gm20441:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr98122	Chr10:75616870-75616944 (-)	-119 bp