Gm20532 Gene Detail

Summary

• Symbol
  Gm20532
• Name
  predicted gene 20532

• Feature Type
  protein coding gene
• IDs
  MGI:5141997
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr2:26476651-26525646 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 18.96 cM

Strain
Comparison

• SNPs within 2kb
  1260 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5141997	protein coding gene	Chr2:26476651-26525646 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0025492	protein coding gene	Chr2:24547675-24608178 (+)
A/J	MGP_AJ_G0025469	protein coding gene	Chr2:23606026-23657442 (+)
AKR/J	MGP_AKRJ_G0025439	protein coding gene	Chr2:24368832-24427656 (+)
BALB/cJ	MGP_BALBcJ_G0025465	protein coding gene	Chr2:23716478-23768104 (+)
C3H/HeJ	MGP_C3HHeJ_G0025226	protein coding gene	Chr2:24332449-24382295 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0025909	protein coding gene	Chr2:25347081-25406521 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0023320	protein coding gene	Chr2:22484396-22532973 (+)
CAST/EiJ	MGP_CASTEiJ_G0024689	protein coding gene	Chr2:24209175-24260064 (+)
CBA/J	MGP_CBAJ_G0025204	protein coding gene	Chr2:26191357-26247411 (+)
DBA/2J	MGP_DBA2J_G0025337	protein coding gene	Chr2:23426549-23476050 (+)
FVB/NJ	MGP_FVBNJ_G0025299	protein coding gene	Chr2:23183521-23235219 (+)
LP/J	MGP_LPJ_G0025423	protein coding gene	Chr2:24491488-24541687 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0025330	protein coding gene	Chr2:26334084-26384698 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0025968	protein coding gene	Chr2:24326616-24379696 (+)
PWK/PhJ	MGP_PWKPhJ_G0024437	protein coding gene	Chr2:23234611-23286336 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0024237	protein coding gene	Chr2:24465170-24516928 (+)
WSB/EiJ	MGP_WSBEiJ_G0024758	protein coding gene	Chr2:24435484-24488296 (+)

Homology

• Gene Tree
  Gm20532
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000092356 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092356	Ensembl Gene Model | MGI Sequence Detail	48996	C57BL/6J
transcript	ENSMUST00000174066	Ensembl | MGI Sequence Detail	780	Not Applicable
polypeptide	ENSMUSP00000133799	Ensembl | MGI Sequence Detail	103	Not Applicable

Protein
Information

• UniProt
  1 Sequence

References

• Summaries
  All 3
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm20532:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr16809	Chr2:26476619-26476676 (+)	-3 bp
Tssr16811	Chr2:26494071-26494086 (+)	17,428 bp
Tssr16812	Chr2:26494516-26494518 (+)	17,866 bp