Gm20714 Gene Detail

Summary

• Symbol
  Gm20714
• Name
  predicted gene 20714

• Feature Type
  lncRNA gene
• IDs
  MGI:5313161
  NCBI Gene: 102637299
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:4807055-4816328 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 1.81 cM

Strain
Comparison

• SNPs within 2kb
  276 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313161	lncRNA gene	Chr6:4807055-4816329 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0006892	lincRNA gene	Chr6:1588559-1597556 (-)
A/J	MGP_AJ_G0006886	lincRNA gene	Chr6:1543311-1552066 (-)
AKR/J	MGP_AKRJ_G0006856	lincRNA gene	Chr6:1587670-1596355 (-)
BALB/cJ	MGP_BALBcJ_G0006862	lincRNA gene	Chr6:1529003-1537539 (-)
C3H/HeJ	MGP_C3HHeJ_G0006807	lincRNA gene	Chr6:1564446-1573194 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007027	lincRNA gene	Chr6:1657434-1665946 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006276	lincRNA gene	Chr6:1288688-1297163 (-)
CAST/EiJ	MGP_CASTEiJ_G0006726	lincRNA gene	Chr6:1548195-1559376 (-)
CBA/J	MGP_CBAJ_G0006789	lincRNA gene	Chr6:1682143-1690681 (-)
DBA/2J	MGP_DBA2J_G0006809	lincRNA gene	Chr6:1511849-1520529 (-)
FVB/NJ	MGP_FVBNJ_G0006832	lincRNA gene	Chr6:1516186-1524787 (-)
LP/J	MGP_LPJ_G0006892	lincRNA gene	Chr6:1569224-1577931 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006814	lincRNA gene	Chr6:1784748-1793740 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007029	lincRNA gene	Chr6:1534028-1542779 (-)
PWK/PhJ	MGP_PWKPhJ_G0006667	lincRNA gene	Chr6:1449149-1457876 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0006575	lincRNA gene	Chr6:1605461-1619957 (-)
WSB/EiJ	MGP_WSBEiJ_G0006780	lincRNA gene	Chr6:1542359-1554331 (-)

Homology

• Gene Tree
  Gm20714
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000093570 (Evidence)
• NCBI Gene
  102637299

Representative Sequences			Length	Strain/Species
genomic	102637299	NCBI Gene Model | MGI Sequence Detail	9274	C57BL/6J
transcript	NR_157243	RefSeq | MGI Sequence Detail	747	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm20714:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr59732	Chr6:4816305-4816320 (-)	15 bp