Lrrc70 Gene Detail

Summary

• Symbol
  Lrrc70
• Name
  leucine rich repeat containing 70

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:5317337
  NCBI Gene: 113523645
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:106970227-106972810 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 58.06 cM

Strain
Comparison

• SNPs within 2kb
  28 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5317337	protein coding gene	Chr13:106970222-106983775 (-)
129S1/SvImJ	ENSMUSG00200033107	pseudogene	Chr13:101400392-101414004 (-)
A/J	ENSMUSG00195013712	pseudogene	Chr13:101969581-101983190 (-)
AKR/J	ENSMUSG00220027781	pseudogene	Chr13:100396339-100409948 (-)
BALB/cJ	ENSMUSG00180029945	pseudogene	Chr13:102543486-102557123 (-)
C3H/HeJ	ENSMUSG00175027554	pseudogene	Chr13:102628002-102641614 (-)
C57BL/6NJ	ENSMUSG00215024523	pseudogene	Chr13:102618262-102631815 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025900	pseudogene	Chr13:101718673-101732300 (-)
CBA/J	ENSMUSG00210011053	pseudogene	Chr13:101953692-101967303 (-)
DBA/2J	ENSMUSG00185027463	pseudogene	Chr13:105715657-105729268 (-)
FVB/NJ	ENSMUSG00205006363	protein coding gene	Chr13:101390982-101392287 (-)
FVB/NJ	ENSMUSG00205007308	pseudogene	Chr13:101391165-101405464 (-)
JF1/MsJ	ENSUMUG00000012937	pseudogene	Chr13:105240465-105254012 (-)
LP/J	ENSMUSG00230007622	pseudogene	Chr13:115868408-115882020 (-)
NOD/ShiLtJ	ENSMUSG00190019697	pseudogene	Chr13:102277330-102290938 (-)
NZO/HlLtJ	ENSMUSG00225037735	pseudogene	Chr13:108140148-108153695 (-)
PWK/PhJ	ENSLUMG00010010125	pseudogene	Chr13:101255042-101268663 (-)
SPRET/EiJ	ENSMSPG00010016987	pseudogene	Chr13:102867288-102880953 (-)
WSB/EiJ	ENSIUOG00005009344	pseudogene	Chr13:101418377-101431988 (-)

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  APF
• Find Mice (IMSR)
  0 strains or lines available

Expression

• cDNA Data
  3

• Other Mouse Links
  Expression Atlas
• Other Vertebrate Links
  Xenbase lrrc70

Sequences &
Gene Models

• All Sequences
  34
• RefSeq
  4
• UniProt
  2

• Ensembl
  ENSMUSG00000118423 (Evidence), ENSMUSG00000121855 (Evidence)
• NCBI Gene
  113523645

Representative Sequences			Length	Strain/Species
genomic	113523645	NCBI Gene Model | MGI Sequence Detail	2584	C57BL/6J
transcript	NM_001378597	RefSeq | MGI Sequence Detail	1209	ZRU/MplStud
polypeptide	NP_001365526	RefSeq | MGI Sequence Detail	191	ZRU/MplStud

Protein
Information

• UniProt
  2 Sequences

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;