Mira Gene Detail

Summary

• Symbol
  Mira
• Name
  mistral long non-coding RNA

• Feature Type
  lncRNA gene
• IDs
  MGI:5433747
  NCBI Gene: 100736249
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:52191471-52192268 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic

Strain
Comparison

• SNPs within 2kb
  58 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5433747	lncRNA gene	Chr6:52191471-52192268 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  8 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Mira
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  1

• NCBI Gene
  100736249

Representative Sequences			Length	Strain/Species
genomic	100736249	NCBI Gene Model | MGI Sequence Detail	798	C57BL/6J
transcript	NR_045199	RefSeq | MGI Sequence Detail	798	Not Specified

References

• Summaries
  All 11

  Phenotypes 8
• Earliest
  J:99350 Kmita M, et al., Early developmental arrest of mammalian limbs lacking HoxA/HoxD gene function. Nature. 2005 Jun 23;435(7045):1113-6
• Latest
  J:207500 Berlivet S, et al., Clustering of tissue-specific sub-TADs accompanies the regulation of HoxA genes in developing limbs. PLoS Genet. 2013 Dec;9(12):e1004018