Gm21781 Gene Detail

Summary

• Symbol
  Gm21781
• Name
  predicted gene, 21781

• Feature Type
  lncRNA gene
• IDs
  MGI:5433945
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:4341587-4346424 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  188 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5433945	lncRNA gene	Chr10:4341587-4346424 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005096	lincRNA gene	Chr10:1382207-1387047 (+)
A/J	MGP_AJ_G0005079	lincRNA gene	Chr10:1313360-1318450 (+)
AKR/J	MGP_AKRJ_G0005057	lincRNA gene	Chr10:1305402-1311756 (+)
BALB/cJ	MGP_BALBcJ_G0005060	lincRNA gene	Chr10:1284542-1289377 (+)
C3H/HeJ	MGP_C3HHeJ_G0005009	lincRNA gene	Chr10:1399183-1404073 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005210	lincRNA gene	Chr10:1414509-1419563 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004617	lincRNA gene	Chr10:1139167-1143745 (+)
CAST/EiJ	MGP_CASTEiJ_G0004956	lincRNA gene	Chr10:1436125-1444029 (+)
CBA/J	MGP_CBAJ_G0004999	lincRNA gene	Chr10:1463498-1468335 (+)
DBA/2J	MGP_DBA2J_G0005018	lincRNA gene	Chr10:1315528-1320367 (+)
FVB/NJ	MGP_FVBNJ_G0005039	lincRNA gene	Chr10:1275056-1279890 (+)
LP/J	MGP_LPJ_G0005097	lincRNA gene	Chr10:1382065-1386902 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005022	lincRNA gene	Chr10:1374832-1379682 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005217	lincRNA gene	Chr10:1322879-1327716 (+)
PWK/PhJ	MGP_PWKPhJ_G0004907	lincRNA gene	Chr10:1316215-1321313 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004832	lincRNA gene	Chr10:1495665-1501530 (+)
WSB/EiJ	MGP_WSBEiJ_G0005003	lincRNA gene	Chr10:1383701-1388567 (+)

Homology

• Gene Tree
  Gm21781
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000095123 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000095123	Ensembl Gene Model | MGI Sequence Detail	4838	C57BL/6J
transcript	ENSMUST00000178920	Ensembl | MGI Sequence Detail	4838	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14