Gm21844 Gene Detail

Summary

• Symbol
  Gm21844
• Name
  predicted gene, 21844

• Feature Type
  lncRNA gene
• IDs
  MGI:5434008
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:4851540-4855812 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434008	lncRNA gene	Chr19:4851540-4855812 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003464	antisense lncRNA gene	Chr19:1698057-1702329 (+)
A/J	MGP_AJ_G0003443	antisense lncRNA gene	Chr19:1619379-1623651 (+)
AKR/J	MGP_AKRJ_G0003423	antisense lncRNA gene	Chr19:1662509-1666781 (+)
BALB/cJ	MGP_BALBcJ_G0003432	antisense lncRNA gene	Chr19:1614808-1619080 (+)
C3H/HeJ	MGP_C3HHeJ_G0003381	antisense lncRNA gene	Chr19:1666838-1671110 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003570	antisense lncRNA gene	Chr19:1752304-1756576 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003083	antisense lncRNA gene	Chr19:1548472-1552924 (+)
CAST/EiJ	MGP_CASTEiJ_G0003344	antisense lncRNA gene	Chr19:1685857-1690133 (+)
CBA/J	MGP_CBAJ_G0003378	antisense lncRNA gene	Chr19:1823955-1828227 (+)
DBA/2J	MGP_DBA2J_G0003386	antisense lncRNA gene	Chr19:1586336-1590608 (+)
FVB/NJ	MGP_FVBNJ_G0003404	antisense lncRNA gene	Chr19:1607461-1611732 (+)
LP/J	MGP_LPJ_G0003458	antisense lncRNA gene	Chr19:1705056-1709328 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003392	antisense lncRNA gene	Chr19:1730131-1734403 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003573	antisense lncRNA gene	Chr19:1658539-1662811 (+)
PWK/PhJ	MGP_PWKPhJ_G0003300	antisense lncRNA gene	Chr19:1635002-1639274 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003245	antisense lncRNA gene	Chr19:1646865-1651128 (+)
WSB/EiJ	MGP_WSBEiJ_G0003378	antisense lncRNA gene	Chr19:1656619-1660890 (+)

Homology

• Gene Tree
  Gm21844
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000095913 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000095913	Ensembl Gene Model | MGI Sequence Detail	4273	C57BL/6J
transcript	ENSMUST00000178699	Ensembl | MGI Sequence Detail	663	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;