Krtap13-24 Gene Detail

Summary

• Symbol
  Krtap13-24
• Name
  keratin associated protein 13-24
• Synonyms
  Gm20741

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:5434097
  NCBI Gene: 433047
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:88608328-88609108 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  187 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434097	protein coding gene	Chr16:88608328-88609108 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Human Ortholog
  KRTAP13-3, keratin associated protein 13-3

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  KRTAP13-3, keratin associated protein 13-3
  
• Synonyms
  KAP13.3
• Links
  HGNC:18925

  NCBI Gene ID: 337960

  neXtProt AC: NX_Q3SY46

  UniProt: Q3SY46

  
  
• Chr Location
  21q22.11; chr21:30425380-30425926 (-)  GRCh38

---

• MGI Vertebrate Homology
  Krtap13-24 stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: KRTAP13-3
• Gene Tree
  Krtap13-24
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  1
• Genomic Mutations
  2 involving Krtap13-24
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  8
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000116636 (Evidence)
• NCBI Gene
  433047

Representative Sequences			Length	Strain/Species
genomic	433047	NCBI Gene Model | MGI Sequence Detail	781	C57BL/6J
transcript	NR_045150	RefSeq | MGI Sequence Detail	824	Not Specified
polypeptide	A0A338P708	UniProt | EBI | MGI Sequence Detail	164	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR007951 Keratin-associated protein, PMG type

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:7593851

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76
• Latest
  J:223383 Arbogast T, et al., Deletion of the App-Runx1 region in mice models human partial monosomy 21. Dis Model Mech. 2015 Jun;8(6):623-34

TSS for Krtap13-24:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr141970	Chr16:88609120-88609124 (-)	-14 bp