Gm20945 Pseudogene Detail

Summary

• Symbol
  Gm20945
• Name
  predicted gene, 20945

• Feature Type
  pseudogene
• IDs
  MGI:5434300
  NCBI Gene: 100415898
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:21359522-21360666 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  155 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434300	pseudogene	Chr8:21359348-21360674 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014053	pseudogene	Chr8:18628845-18629989 (-)
A/J	MGP_AJ_G0014068	pseudogene	Chr8:18015749-18016893 (-)
AKR/J	MGP_AKRJ_G0014002	pseudogene	Chr8:18667857-18669001 (-)
BALB/cJ	MGP_BALBcJ_G0014025	pseudogene	Chr8:18153113-18154257 (-)
C3H/HeJ	MGP_C3HHeJ_G0013857	pseudogene	Chr8:18843246-18844390 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014459	pseudogene	Chr8:19245661-19246805 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010328	pseudogene	Chr2:6622373-6624853 (+)
CAST/EiJ	MGP_CASTEiJ_G0011182	pseudogene	Chr2:7316032-7318329 (+)
CBA/J	MGP_CBAJ_G0013839	pseudogene	Chr8:20206977-20208121 (-)
DBA/2J	MGP_DBA2J_G0013917	pseudogene	Chr8:18018455-18019599 (-)
FVB/NJ	MGP_FVBNJ_G0013914	pseudogene	Chr8:17741312-17742456 (-)
LP/J	MGP_LPJ_G0014000	pseudogene	Chr8:18686306-18687450 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011410	pseudogene	Chr2:7925476-7927780 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014433	pseudogene	Chr8:18545958-18547102 (-)
PWK/PhJ	MGP_PWKPhJ_G0011039	pseudogene	Chr2:7024641-7027645 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013104	pseudogene	Chr8:18044393-18045530 (-)
WSB/EiJ	MGP_WSBEiJ_G0011205	pseudogene	Chr2:7385216-7387698 (+)

Homology

• Gene Tree
  Gm20945
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm20945
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000094534 (Evidence)
• NCBI Gene
  100415898

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094534	Ensembl Gene Model | MGI Sequence Detail	1145	C57BL/6J
transcript	ENSMUST00000178122	Ensembl | MGI Sequence Detail	1145	Not Applicable

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:332494 Dong X, et al., Keratinocyte-derived defensins activate neutrophil-specific receptors Mrgpra2a/b to prevent skin dysbiosis and bacterial infection. Immunity. 2022 Jul 15;55(9):1645-1662