Gm21190 Gene Detail

Summary

• Symbol
  Gm21190
• Name
  predicted gene, 21190

• Feature Type
  protein coding gene
• IDs
  MGI:5434545
  NCBI Gene: 100861755
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:15729454-15734220 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434545	protein coding gene	Chr5:15729454-15734220 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0029303	protein coding gene	Chr5:14854028-14858815 (+)
A/J	MGP_AJ_G0017178	protein coding gene	Chr10:41822527-41840226 (+)
AKR/J	MGP_AKRJ_G0029219	protein coding gene	Chr5:15028612-15030177 (+)
BALB/cJ	MGP_BALBcJ_G0017140	protein coding gene	Chr10:41900460-41910174 (+)
C3H/HeJ	MGP_C3HHeJ_G0029062	protein coding gene	Chr5:24302685-24304593 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0028966	protein coding gene	Chr5:16154099-16162049 (+)
DBA/2J	MGP_DBA2J_G0029117	protein coding gene	Chr5:14587912-14594727 (+)
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0029765	protein coding gene	Chr5:14539091-14543796 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• MGI Vertebrate Homology
  Gm21190 stringent orthology
  1 mouse;4 rat
  
• Gene Tree
  Gm21190
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm21190
• Find Mice (IMSR)
  6 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS80210.1

• Ensembl
  ENSMUSG00000106445 (Evidence)
• NCBI Gene
  100861755

Representative Sequences			Length	Strain/Species
genomic	100861755	NCBI Gene Model | MGI Sequence Detail	4767	C57BL/6J
transcript	NM_001310449	RefSeq | MGI Sequence Detail	1196	Not Specified
polypeptide	NP_001297378	RefSeq | MGI Sequence Detail	266	Not Specified

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR006907 Disks large homolog 5, N-terminal

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:155721 Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI), Consensus CDS project. Database Download. 2010;