Gm21358 Pseudogene Detail

Summary

• Symbol
  Gm21358
• Name
  predicted gene, 21358

• Feature Type
  pseudogene
• IDs
  MGI:5434713
  NCBI Gene: 100861962
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:120332815-120335190 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  50 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434713	pseudogene	Chr13:120326384-120335190 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010547	pseudogene	Chr10:120532390-120534047 (+)
A/J	MGP_AJ_G0010541	pseudogene	Chr10:115798058-115799715 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0011043	pseudogene	Chr13:118509186-118510936 (-)
C3H/HeJ	MGP_C3HHeJ_G0010439	pseudogene	Chr10:119421101-119423728 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0009454	pseudogene	Chr10:110374989-110376667 (+)
CAST/EiJ	MGP_CASTEiJ_G0010264	pseudogene	Chr10:119732749-119734406 (+)
CBA/J	MGP_CBAJ_G0010409	pseudogene	Chr10:129585031-129586688 (+)
DBA/2J	MGP_DBA2J_G0010958	pseudogene	Chr13:117419796-117422550 (-)
FVB/NJ	MGP_FVBNJ_G0010457	pseudogene	Chr10:113922208-113923865 (+)
LP/J	MGP_LPJ_G0011047	pseudogene	Chr13:122898606-122912222 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0010762	pseudogene	Chr10:119274857-119276514 (+)
PWK/PhJ	MGP_PWKPhJ_G0010164	pseudogene	Chr10:115056408-115058185 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009977	pseudogene	Chr10:118054084-118055729 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm21358
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000103877 (Evidence)
• NCBI Gene
  100861962

Representative Sequences			Length	Strain/Species
genomic	100861962	NCBI Gene Model | MGI Sequence Detail	2376	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;