Gm21959 Pseudogene Detail

Summary

• Symbol
  Gm21959
• Name
  predicted gene, 21959

• Feature Type
  pseudogene
• IDs
  MGI:5439428
  NCBI Gene: 118568092
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:76832101-76832552 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  174 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5439428	pseudogene	Chr13:76829980-76832567 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011041	pseudogene	Chr13:77241362-77241781 (-)
A/J	MGP_AJ_G0011042	pseudogene	Chr13:74607575-74607994 (-)
AKR/J	MGP_AKRJ_G0010997	pseudogene	Chr13:76883040-76883459 (-)
BALB/cJ	MGP_BALBcJ_G0011017	pseudogene	Chr13:75102460-75102879 (-)
C3H/HeJ	MGP_C3HHeJ_G0010916	pseudogene	Chr13:76585832-76586251 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011296	pseudogene	Chr13:79828412-79828828 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009890	pseudogene	Chr13:71373486-71373888 (-)
CAST/EiJ	MGP_CASTEiJ_G0010737	pseudogene	Chr13:75673074-75673494 (-)
CBA/J	MGP_CBAJ_G0010888	pseudogene	Chr13:82868561-82868980 (-)
DBA/2J	MGP_DBA2J_G0010933	pseudogene	Chr13:74314047-74314466 (-)
FVB/NJ	MGP_FVBNJ_G0010944	pseudogene	Chr13:73378677-73379096 (-)
LP/J	MGP_LPJ_G0011022	pseudogene	Chr13:77508102-77508521 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010929	pseudogene	Chr13:81298480-81298899 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011278	pseudogene	Chr13:76180058-76180477 (-)
PWK/PhJ	MGP_PWKPhJ_G0010614	pseudogene	Chr13:73228615-73229031 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010436	pseudogene	Chr13:72585153-72585506 (-)
WSB/EiJ	MGP_WSBEiJ_G0010787	pseudogene	Chr13:76697940-76698360 (-)

Homology

• Gene Tree
  Gm21959
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm21959
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000096216 (Evidence)
• NCBI Gene
  118568092

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000096216	Ensembl Gene Model | MGI Sequence Detail	452	C57BL/6J
transcript	ENSMUST00000178439	Ensembl | MGI Sequence Detail	452	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69