Gm21963 Pseudogene Detail

Summary

• Symbol
  Gm21963
• Name
  predicted gene, 21963

• Feature Type
  pseudogene
• IDs
  MGI:5439432
  NCBI Gene: 118568052
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:62926596-62926848 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5439432	pseudogene	Chr13:62926596-62926925 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011025	pseudogene	Chr13:62687272-62687607 (+)
A/J	MGP_AJ_G0011028	pseudogene	Chr13:60441199-60441534 (+)
AKR/J	MGP_AKRJ_G0010980	pseudogene	Chr13:62447953-62448246 (+)
BALB/cJ	MGP_BALBcJ_G0011002	pseudogene	Chr13:60860316-60860651 (+)
C3H/HeJ	MGP_C3HHeJ_G0010900	pseudogene	Chr13:62008926-62009261 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011284	pseudogene	Chr13:64767406-64767741 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010722	pseudogene	Chr13:61972917-61973199 (+)
CBA/J	MGP_CBAJ_G0010872	pseudogene	Chr13:67242257-67242592 (+)
DBA/2J	MGP_DBA2J_G0010918	pseudogene	Chr13:60287829-60288164 (+)
FVB/NJ	MGP_FVBNJ_G0010931	pseudogene	Chr13:59405377-59405712 (+)
LP/J	MGP_LPJ_G0011007	pseudogene	Chr13:62994010-62994345 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0011263	pseudogene	Chr13:61771156-61771491 (+)
PWK/PhJ	MGP_PWKPhJ_G0010606	pseudogene	Chr13:59851724-59852006 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013053	pseudogene	Chr7:113460074-113460353 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm21963
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm21963
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000095895 (Evidence)
• NCBI Gene
  118568052

Representative Sequences			Length	Strain/Species
genomic	118568052	NCBI Gene Model | MGI Sequence Detail	253	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69

TSS for Gm21963:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr120162	Chr13:62926410-62926418 (+)	-182 bp